RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 FAM214BQ7L5A3 538 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 KLF14Q8TD94 323 aaPredicted RBP13.5□□□□□ -0.25
USHBP1-202ENST00000324554 CA5BP1Q8WTZ4 195 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 HES4Q9HCC6 221 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 TINAGQ9UJW2 476 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 TMEM210A6NLX4 147 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 SPANXN5Q5MJ07 72 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 CDPF1Q6NVV7 123 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 INO80CQ6PI98 192 aaPredicted RBP13.5□□□□□ -0.25
USHBP1-202ENST00000324554 Q6ZT83 130 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 TRIB1Q96RU8 372 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 PSMG3Q9BT73 122 aaPredicted RBP13.5□□□□□ -0.25
USHBP1-202ENST00000324554 SCNM1Q9BWG6 230 aa13.5□□□□□ -0.25
USHBP1-202ENST00000324554 GTF3C1Q12789 2109 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 MLNRO43193 412 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 IGFL2Q6UWQ7 119 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 LILRB2Q8N423 598 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 OR4C12Q96R67 309 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 TAAR6Q96RI8 345 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 C1QTNF9BB2RNN3 333 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 IGHG3P01860 377 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-202ENST00000324554 NHLH1Q02575 133 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 GUSBP1Q15486 140 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 FAM180AQ6UWF9 173 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 CXorf67Q86X51 503 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-202ENST00000324554 FGFRL1Q8N441 504 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 OR1L1Q8NH94 360 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 SSX3Q99909 188 aa13.49□□□□□ -0.25
USHBP1-202ENST00000324554 WDR61Q9GZS3 305 aaKnown RBP13.49□□□□□ -0.25
USHBP1-202ENST00000324554 TMEM30CPA0ZSE6 113 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 B4DEV8 164 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 WNT9BO14905 357 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 RD3LP0DJH9 198 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 ELLP55199 621 aaPredicted RBP13.48□□□□□ -0.25
USHBP1-202ENST00000324554 HBG1P69891 147 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 HBG2P69892 147 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 HNF4GQ14541 408 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 FIP1L1Q6UN15 594 aaKnown RBP13.48□□□□□ -0.25
USHBP1-202ENST00000324554 ZNF826PQ6ZT77 177 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 C11orf53Q8IXP5 236 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 OR3A1P47881 315 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 FAM53AQ6NSI3 398 aaPredicted RBP13.48□□□□□ -0.25
USHBP1-202ENST00000324554 BEND4Q6ZU67 534 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 ZNF645Q8N7E2 425 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 ABHD5Q8WTS1 349 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 GAR1Q9NY12 217 aaKnown RBP13.48□□□□□ -0.25
USHBP1-202ENST00000324554 KCNIP1Q9NZI2 227 aa13.48□□□□□ -0.25
USHBP1-202ENST00000324554 UBE2L5PA0A1B0GUS4 154 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 RNF212BA8MTL3 300 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 C12orf77C9JDV5 145 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 AGFG2O95081 481 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 IGKV1D-33P01593 117 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 IGKV1-33P01594 117 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 IGKV3-15P01624 115 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 SOD3P08294 240 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 SERF2P84101 59 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 CNEP1R1Q8N9A8 125 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 GALMQ96C23 342 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 C5orf30Q96GV9 206 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 FAM210BQ96KR6 192 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 RBKSQ9H477 322 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 RNF150Q9ULK6 438 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 RAMP3O60896 148 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-202ENST00000324554 RND2P52198 227 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-202ENST00000324554 TMEM41BQ5BJD5 291 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 PDZD11Q5EBL8 140 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 FRZBQ92765 325 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 OR2D2Q9H210 308 aa13.47□□□□□ -0.25
USHBP1-202ENST00000324554 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 GFRA3O60609 400 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 AESQ08117 197 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 OR8G2PQ6IF36 304 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 VWA1Q6PCB0 445 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 ZADH2Q8N4Q0 377 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 RPP25LQ8N5L8 163 aaKnown RBP13.46□□□□□ -0.25
USHBP1-202ENST00000324554 TAF15Q92804 592 aaKnown RBP eCLIP13.46□□□□□ -0.25
USHBP1-202ENST00000324554 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 BSNQ9UPA5 3926 aa13.46□□□□□ -0.25
USHBP1-202ENST00000324554 FAM90A26D6RGX4 464 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 CLDN34H7C241 214 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 CEACAM4O75871 244 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 TRGC1P0CF51 173 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 COX5AP20674 150 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 S100A2P29034 98 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 KIR2DL2P43627 348 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-202ENST00000324554 RPL30P62888 115 aaKnown RBP13.45□□□□□ -0.26
USHBP1-202ENST00000324554 TLE1Q04724 770 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 OR2B11Q5JQS5 317 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 SLC35E4Q6ICL7 350 aa13.45□□□□□ -0.26
USHBP1-202ENST00000324554 Q6ZR03 302 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms