RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ARHGAP5-AS1Q96IT6 56 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 CLCC1Q96S66 551 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 AGMATQ9BSE5 352 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 C11orf54Q9H0W9 315 aaPredicted RBP9.55□□□□□ -0.88
TPM3-204ENST00000323144 VCXQ9H320 206 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 PLEKHJ1Q9NW61 149 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 PIPOXQ9P0Z9 390 aa9.55□□□□□ -0.88
TPM3-204ENST00000323144 H7C2Y5 167 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 OVOL1O14753 267 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 PROP1O75360 226 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 IGKV1-16P04430 117 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 CD37P11049 281 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 MAP2K4P45985 399 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 VEGFCP49767 419 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 SSBP2P81877 361 aaPredicted RBP9.54□□□□□ -0.88
TPM3-204ENST00000323144 FABP5Q01469 135 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 RAB11BQ15907 218 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 PLAC9Q5JTB6 97 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 ZNF383Q8NA42 475 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 OR5AN1Q8NGI8 311 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 DLX4Q92988 240 aaPredicted RBP9.54□□□□□ -0.88
TPM3-204ENST00000323144 PECRQ9BY49 303 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 TOLLIPQ9H0E2 274 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 Q9N2K0 584 aa9.54□□□□□ -0.88
TPM3-204ENST00000323144 METTL1Q9UBP6 276 aaKnown RBP9.54□□□□□ -0.88
TPM3-204ENST00000323144 SHISA3A0PJX4 238 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 HSPA12AO43301 675 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 SAP30O75446 220 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 CD3GP09693 182 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 ARSBP15848 533 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 CALRP27797 417 aaKnown RBP9.53□□□□□ -0.88
TPM3-204ENST00000323144 TMEM50BP56557 158 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 TPPP2P59282 170 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 PSG5Q15238 335 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 MOGAT2Q3SYC2 334 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 HES5Q5TA89 166 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 FAM89BQ8N5H3 189 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 GRPEL2Q8TAA5 225 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 MAFIPQ8WZ33 124 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 CHCHD6Q9BRQ6 235 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 URM1Q9BTM9 101 aaKnown RBP9.53□□□□□ -0.88
TPM3-204ENST00000323144 ZMAT5Q9UDW3 170 aaKnown RBP9.53□□□□□ -0.88
TPM3-204ENST00000323144 RNF150Q9ULK6 438 aa9.53□□□□□ -0.88
TPM3-204ENST00000323144 TMEM272A0A1B0GTI8 110 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 LINC01619G3V211 115 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 M0R1X1 148 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 ITGB1BP1O14713 200 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 ARPC1BO15143 372 aaKnown RBP9.52□□□□□ -0.89
TPM3-204ENST00000323144 LDLRAD4O15165 306 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 RGS10O43665 173 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 SLC25A17O43808 307 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 GSTP1P09211 210 aaKnown RBP9.52□□□□□ -0.89
TPM3-204ENST00000323144 SPNP16150 400 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 CEACAM6P40199 344 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 OR10A3P58181 314 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 MLLT11Q13015 90 aaPredicted RBP9.52□□□□□ -0.89
TPM3-204ENST00000323144 TPBGQ13641 420 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 ZNF660Q6AZW8 331 aaPredicted RBP9.52□□□□□ -0.89
TPM3-204ENST00000323144 UNQ5815/PRO19632Q6UWF5 114 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 EDARADDQ8WWZ3 215 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 MS4A10Q96PG2 267 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 CMSS1Q9BQ75 279 aaKnown RBP9.52□□□□□ -0.89
TPM3-204ENST00000323144 DUSP21Q9H596 190 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 SCN3BQ9NY72 215 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 RDH8Q9NYR8 311 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 LRRC42Q9Y546 428 aa9.52□□□□□ -0.89
TPM3-204ENST00000323144 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
TPM3-204ENST00000323144 A0A0B4J203 849 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 TRIM64CA6NLI5 447 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 RBBP9O75884 186 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 SPDEFO95238 335 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 FCGR3AP08637 254 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 CPEP16870 476 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 ZBTB25P24278 435 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 SSX1Q16384 188 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 ACTBL2Q562R1 376 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 CD200R1LQ6Q8B3 271 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 OVCH2Q7RTZ1 564 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 TCTEX1D1Q8N7M0 179 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 LFNGQ8NES3 379 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 CABLES2Q9BTV7 478 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 CCDC90BQ9GZT6 254 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 OR2D2Q9H210 308 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 HSF4Q9ULV5 492 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 KCNK7Q9Y2U2 307 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 NUBP2Q9Y5Y2 271 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 DNAH7Q8WXX0 4024 aa9.51□□□□□ -0.89
TPM3-204ENST00000323144 SMIM30A4D0T7 59 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 BET1O15155 118 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 ARL6IP5O75915 188 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 IGLV2-23P01705 113 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 APOA2P02652 100 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 TFAP2AP05549 437 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
TPM3-204ENST00000323144 CRHBPP24387 322 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 MC5RP33032 325 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 INSL3P51460 131 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 PJVKQ0ZLH3 352 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms