RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 SSX9Q7RTT3 188 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 OR5D13Q8NGL4 314 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 CCL17Q92583 94 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 SPIN2AQ99865 258 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 SPIN2BQ9BPZ2 258 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 MAP1AP78559 2803 aaPredicted RBP13.29□□□□□ -0.28
SHISA2-201ENST00000319420 ZNF585BQ52M93 769 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 EIF5AL1Q6IS14 154 aaKnown RBP13.29□□□□□ -0.28
SHISA2-201ENST00000319420 NKX6-2Q9C056 277 aaPredicted RBP13.29□□□□□ -0.28
SHISA2-201ENST00000319420 ARV1Q9H2C2 271 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 PLEKHF2Q9H8W4 249 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 UQCC1Q9NVA1 299 aa13.29□□□□□ -0.28
SHISA2-201ENST00000319420 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 ODAMA1E959 279 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 ZNF737O75373 536 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 IGKV1-5P01602 117 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 PVALBP20472 110 aaPredicted RBP13.28□□□□□ -0.28
SHISA2-201ENST00000319420 TMEM88Q6PEY1 159 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 FAM90A1Q86YD7 464 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 OR5C1Q8NGR4 320 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 TMPRSS2O15393 492 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 SPINT2O43291 252 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 SNAPINO95295 136 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 ACACBO00763 2458 aa13.28□□□□□ -0.28
SHISA2-201ENST00000319420 C17orf98A8MV24 154 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 C1QTNF9BB2RNN3 333 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 C1QTNF9P0C862 333 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 CD200P41217 278 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 RUNX1Q01196 453 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 MZT1Q08AG7 82 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 LY6DQ14210 128 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 SPAG16Q8N0X2 631 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 TMEM252Q8N6L7 170 aa13.27□□□□□ -0.28
SHISA2-201ENST00000319420 RPS23P62266 143 aaKnown RBP13.27□□□□□ -0.29
SHISA2-201ENST00000319420 ID3Q02535 119 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 RBPJQ06330 500 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 ADIPOQQ15848 244 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 SWI5Q1ZZU3 235 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 IL34Q6ZMJ4 242 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 GINS3Q9BRX5 216 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 HIVEP3Q5T1R4 2406 aa13.27□□□□□ -0.29
SHISA2-201ENST00000319420 IGLV3-9A0A075B6K5 115 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 TXNL1O43396 289 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 S1PR2O95136 353 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 SPP1P10451 314 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 TUBG1P23258 451 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 RPL39P5Q59GN2 51 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 TMEM182Q6ZP80 229 aaPredicted RBP13.26□□□□□ -0.29
SHISA2-201ENST00000319420 SLC16A13Q7RTY0 426 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 VKORC1L1Q8N0U8 176 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 ABHD14AQ9BUJ0 271 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 TUBG2Q9NRH3 451 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 ZNRD1Q9P1U0 126 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 BORCS7-ASMTA0A0B4J1R7 106 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 RNASEK-C17orf49H0YIS7 233 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 METTL15P1P0C7V9 234 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 NDUFB7P17568 137 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 DYNLT3P51808 116 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 PAX9P55771 341 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 PARP11Q9NR21 331 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 ZFP57Q9NU63 452 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 LIN7CQ9NUP9 197 aaKnown RBP13.26□□□□□ -0.29
SHISA2-201ENST00000319420 RNF7Q9UBF6 113 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 ZFYVE26Q68DK2 2539 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 LINC00473A8K010 186 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 EIF3GO75821 320 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHISA2-201ENST00000319420 CLDN1O95832 211 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 GNG10P50151 68 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 ZNF295-AS1Q8N0V1 137 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 ZNF645Q8N7E2 425 aa13.26□□□□□ -0.29
SHISA2-201ENST00000319420 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 DYSFO75923 2080 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CLEC18AA5D8T8 446 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CCL21O00585 134 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CLDN14O95500 239 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 PLAUP00749 431 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 DANCRP0C864 163 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 IRF2P14316 349 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 TNFSF4P23510 183 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 PTAFRP25105 342 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 NPBWR1P48145 328 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 TLE1Q04724 770 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 MIDNQ504T8 468 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 AKIRIN2Q53H80 203 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 SPANXN5Q5MJ07 72 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 SLC25A24Q6NUK1 477 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CLEC18CQ8NCF0 446 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 FAM212BQ9NTI7 297 aaPredicted RBP13.25□□□□□ -0.29
SHISA2-201ENST00000319420 LYRM2Q9NU23 88 aaPredicted RBP13.25□□□□□ -0.29
SHISA2-201ENST00000319420 RNF115Q9Y4L5 304 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 IFNL4K9M1U5 179 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 GATCO43716 136 aaKnown RBP13.25□□□□□ -0.29
SHISA2-201ENST00000319420 SEC11BP0C7V7 166 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CDSNQ15517 529 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CBLN2Q8IUK8 224 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 CACFD1Q9UGQ2 172 aa13.25□□□□□ -0.29
SHISA2-201ENST00000319420 NPIPB11E5RHQ5 1161 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms