RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 C10orf142B7Z368 130 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 CA11O75493 328 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 GDF1P27539 372 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 CEACAM6P40199 344 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 IL24Q13007 206 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 ZNF324BQ6AW86 544 aaPredicted RBP8.12□□□□□ -1.11
RPGR-201ENST00000318842 TMEM211Q6ICI0 200 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 WDR5BQ86VZ2 330 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR52L2PQ8NGH6 319 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR10G4Q8NGN3 311 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR10G9Q8NGN4 311 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR10G7Q8NGN6 311 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 TAF15Q92804 592 aaKnown RBP eCLIP8.12□□□□□ -1.11
RPGR-201ENST00000318842 SPIN2AQ99865 258 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 SPIN2BQ9BPZ2 258 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 GRPP07492 148 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 RND2P52198 227 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 TCL1AP56279 114 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 Q0VFX4 171 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 HLA-DRB5Q30154 266 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 MAJINQ3KP22 176 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 TMEM42Q69YG0 159 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 H1FOOQ8IZA3 346 aaPredicted RBP8.12□□□□□ -1.11
RPGR-201ENST00000318842 VN1R17PQ8TDU5 208 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 WDR61Q9GZS3 305 aaKnown RBP8.12□□□□□ -1.11
RPGR-201ENST00000318842 TRAPPC2LQ9UL33 140 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 COL5A1P20908 1838 aaPredicted RBP8.12□□□□□ -1.11
RPGR-201ENST00000318842 ETV2O00321 342 aaPredicted RBP8.12□□□□□ -1.11
RPGR-201ENST00000318842 TP53I11O14683 189 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 DFFBO76075 338 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 S1PR2O95136 353 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 MYOD1P15172 320 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 MSX1P28360 303 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 GNG10P50151 68 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR5I1Q13606 314 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 RPS19BP1Q86WX3 136 aaKnown RBP8.12□□□□□ -1.11
RPGR-201ENST00000318842 KMT5CQ86Y97 462 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 FGFRL1Q8N441 504 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 DTD1Q8TEA8 209 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR5B12Q96R08 314 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 OR51I2Q9H344 312 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 FKBP11Q9NYL4 201 aa8.12□□□□□ -1.11
RPGR-201ENST00000318842 B4E171 279 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 OPN1MWP04001 364 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 OPN1MW2P0DN77 364 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 OPN1MW3P0DN78 364 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 ADMP35318 185 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 HES3Q5TGS1 186 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 ABLIM2Q6H8Q1 611 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 LHFPL4Q7Z7J7 247 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 ST6GALNAC3Q8NDV1 305 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 SSMEM1Q8WWF3 244 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 SRD5A3Q9H8P0 318 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 DLL3Q9NYJ7 618 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 TP53TG5Q9Y2B4 290 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 OR2W1Q9Y3N9 320 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 KIAA1549Q9HCM3 1950 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 EP300Q09472 2414 aaPredicted RBP8.11□□□□□ -1.11
RPGR-201ENST00000318842 LRBAP50851 2863 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 TRBV24-1A0A075B6N3 115 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 LY6G6EA0A0G2JKS1 128 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 C17orf98A8MV24 154 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 CDIPTO14735 213 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 HBE1P02100 147 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 COX6A1P12074 109 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 SSR4P51571 173 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 B3GALT5-AS1P59052 145 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 DRAM1Q8N682 238 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 OR2T10Q8NGZ9 312 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 LEAP2Q969E1 77 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 OPN3Q9H1Y3 402 aaPredicted RBP8.11□□□□□ -1.11
RPGR-201ENST00000318842 MANBALQ9NQG1 85 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 TRAPPC1Q9Y5R8 145 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 U3KQA8 63 aa8.11□□□□□ -1.11
RPGR-201ENST00000318842 IGLV3-12A0A075B6K2 115 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 C11orf94C9JXX5 98 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 H0Y980 276 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 PLXNB1O43157 2135 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 KLF7O75840 302 aaPredicted RBP8.1□□□□□ -1.11
RPGR-201ENST00000318842 CFIP05156 583 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 GNB1P62873 340 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 TMEM41BQ5BJD5 291 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 SAPCD1Q5SSQ6 148 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 CPT1CQ8TCG5 803 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 OIT3Q8WWZ8 545 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 DNASE2BQ8WZ79 361 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 MS4A10Q96PG2 267 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 OR2D2Q9H210 308 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 PIEZO2Q9H5I5 2752 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 IGHV1-45A0A0A0MS14 117 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 SH2D1BO14796 132 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 WISP2O76076 250 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 KBTBD11O94819 623 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 PDGFBP01127 241 aaPredicted RBP8.1□□□□□ -1.11
RPGR-201ENST00000318842 IGLV3-19P01714 112 aa8.1□□□□□ -1.11
RPGR-201ENST00000318842 DSCR4P56555 118 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms