RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 PTX4Q96A99 478 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 KLHDC3Q9BQ90 382 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 RBM24Q9BX46 236 aaKnown RBP8.01□□□□□ -1.13
CAPN3-201ENST00000318023 OR51I2Q9H344 312 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 TMEM50BP56557 158 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 PIGPP57054 158 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 SUMO1P63165 101 aaKnown RBP8.01□□□□□ -1.13
CAPN3-201ENST00000318023 FFAR4Q5NUL3 377 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 FHL5Q5TD97 284 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 OR2C3Q8N628 320 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 OR8G5Q8NG78 346 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 OR4C3Q8NH37 302 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 TSPAN32Q96QS1 320 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 ABHD6Q9BV23 337 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 SAMD10Q9BYL1 202 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 HIPK2Q9H2X6 1198 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 TEX15Q9BXT5 2789 aa8.01□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF814B7Z6K7 855 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 C11orf98E9PRG8 122 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 MMP23AO75900 390 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 IL3RAP26951 378 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 TPPP2P59282 170 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 GNMTQ14749 295 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 FAM78BQ5VT40 261 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 STARD4Q96DR4 205 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 ZC2HC1AQ96GY0 325 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 VSTM2LQ96N03 204 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 VSIRQ9H7M9 311 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 CHCHD2Q9Y6H1 151 aaPredicted RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 A0A0U1RQK1 487 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 F2Z2F3 143 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 SSSCA1O60232 199 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 SERF1AO75920 110 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 IGKV1D-16P01601 117 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 HBE1P02100 147 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 IGLC2P0DOY2 106 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 IGLC3P0DOY3 106 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 HSD11B1P28845 292 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 DYNLT3P51808 116 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 FXYD4P59646 89 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 RPS4XP62701 263 aaKnown RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 RPL23P62829 140 aaKnown RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 ARL6IP1Q15041 203 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 OR4A47Q6IF82 309 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 GLIPR1L1Q6UWM5 242 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 CATSPERDQ86XM0 798 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 LYPD6Q86Y78 171 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 CTHRC1Q96CG8 243 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 WNT10AQ9GZT5 417 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 TP73-AS1Q9UF72 201 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 ARR3P36575 388 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 LINC00310P59036 64 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 MEX3BQ6ZN04 569 aaKnown RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 OR4B1Q8NGF8 309 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 SMIM12Q96EX1 92 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 ADAT3Q96EY9 351 aaPredicted RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 TMEM56Q96MV1 263 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 IMMP2LQ96T52 175 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 CISD1Q9NZ45 108 aaKnown RBP8□□□□□ -1.13
CAPN3-201ENST00000318023 NAT8Q9UHE5 227 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 FBXL7Q9UJT9 491 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 TP53TG3Q9ULZ0 132 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 TMEM56-RWDD3S4R434 201 aa8□□□□□ -1.13
CAPN3-201ENST00000318023 TRAV30A0A087WSZ9 112 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 CRYM-AS1A6NIL9 109 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 DIRC3C9JPN6 131 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 BPNT1O95861 308 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 ADMP35318 185 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF93P35789 620 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-201ENST00000318023 OR3A4PP47883 348 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 RPL18Q07020 188 aaKnown RBP7.99□□□□□ -1.13
CAPN3-201ENST00000318023 ZNF154Q13106 437 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 SNAI3Q3KNW1 292 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 SLC18B1Q6NT16 456 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 OR5AU1Q8NGC0 362 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 OR5D18Q8NGL1 313 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 OR10G4Q8NGN3 311 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 SGCZQ96LD1 299 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 RSG1Q9BU20 258 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 CLEC5AQ9NY25 188 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 BET1LQ9NYM9 111 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 C19orf53Q9UNZ5 99 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-201ENST00000318023 A0A1W2PR80 420 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 H3BML4 177 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
CAPN3-201ENST00000318023 RENP00797 406 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 UBE2NP61088 152 aaKnown RBP7.99□□□□□ -1.13
CAPN3-201ENST00000318023 IL13RA2Q14627 380 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 RAET1LQ5VY80 246 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 LINC00114Q6XXX2 140 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 LINC00346Q8IVM7 164 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 ANKHD1Q8IWZ3 2542 aaKnown RBP7.99□□□□□ -1.13
CAPN3-201ENST00000318023 SLC22A24Q8N4F4 322 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 FAM173AQ9BQD7 235 aa7.99□□□□□ -1.13
CAPN3-201ENST00000318023 TEP1Q99973 2627 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms