RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 TRAV8-6A0A0B4J262 113 aa11.54□□□□□ -0.56
AFF3-201ENST00000317233 ASPDHA6ND91 283 aa11.54□□□□□ -0.56
AFF3-201ENST00000317233 MUC1P15941 1255 aaPredicted RBP11.54□□□□□ -0.56
AFF3-201ENST00000317233 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
AFF3-201ENST00000317233 C10orf111Q8N326 155 aa11.54□□□□□ -0.56
AFF3-201ENST00000317233 LINC01587Q99440 93 aa11.54□□□□□ -0.56
AFF3-201ENST00000317233 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 A0A1B0GWB2 263 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 ARRDC5A6NEK1 342 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 SLC16A13Q7RTY0 426 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 MYF5P13349 255 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 LMO3Q8TAP4 145 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 ZNF384Q8TF68 577 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
AFF3-201ENST00000317233 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 FAM27D1Q5T7N8 215 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 PCSK4Q6UW60 755 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 APOMO95445 188 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 VAX1Q5SQQ9 334 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 GAPTQ8N292 157 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 C10orf35Q96D05 121 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 SPCS1Q9Y6A9 102 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 RAG2P55895 527 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 SELENOHQ8IZQ5 122 aaKnown RBP11.53□□□□□ -0.56
AFF3-201ENST00000317233 EMCNQ9ULC0 261 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 NUP188Q5SRE5 1749 aa11.53□□□□□ -0.56
AFF3-201ENST00000317233 EIF3GO75821 320 aaKnown RBP eCLIP11.52□□□□□ -0.56
AFF3-201ENST00000317233 ACSF3Q4G176 576 aaPredicted RBP11.52□□□□□ -0.56
AFF3-201ENST00000317233 STHQ8IWL8 128 aa11.52□□□□□ -0.56
AFF3-201ENST00000317233 CCL4L1Q8NHW4 92 aa11.52□□□□□ -0.56
AFF3-201ENST00000317233 LINC00869P0C866 280 aa11.52□□□□□ -0.56
AFF3-201ENST00000317233 SRSF12Q8WXF0 261 aaKnown RBP11.52□□□□□ -0.56
AFF3-201ENST00000317233 MS4A4AQ96JQ5 239 aa11.52□□□□□ -0.56
AFF3-201ENST00000317233 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 EFNB2P52799 333 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 DEGS2Q6QHC5 323 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 RNF182Q8N6D2 247 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 PARLQ9H300 379 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 LNP1A1A4G5 178 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 RRHO14718 337 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 ABHD1Q96SE0 405 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 LILRA1O75019 489 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 MROH1Q8NDA8 1641 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 IGHV4-39P01824 125 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 OTX1P32242 354 aaPredicted RBP11.52□□□□□ -0.57
AFF3-201ENST00000317233 ZFP36L2P47974 494 aaKnown RBP11.52□□□□□ -0.57
AFF3-201ENST00000317233 HCP5Q6MZN7 132 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.57
AFF3-201ENST00000317233 A1L4Q6 167 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 CLDN14O95500 239 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 WDR38Q5JTN6 314 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 C1orf185Q5T7R7 199 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 SH2D5Q6ZV89 423 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 ZNF414Q96IQ9 312 aa11.52□□□□□ -0.57
AFF3-201ENST00000317233 ZNF48Q96MX3 618 aaPredicted RBP11.52□□□□□ -0.57
AFF3-201ENST00000317233 HMX2A2RU54 273 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 TMEM50AO95807 157 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 AMY1AP04745 511 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 PDLIM4P50479 330 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 ZNF818PQ6ZRF7 136 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 PRSS42Q7Z5A4 293 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 ROS1P08922 2347 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 MRC1P22897 1456 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 CA1P00915 261 aaPredicted RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 SNRPCP09234 159 aaKnown RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 PMS2CLQ68D20 193 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 Q6ZNX1 250 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 SCN11AQ9UI33 1791 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 INO80CQ6PI98 192 aaPredicted RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 Q6ZSR9 355 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 RARRES2Q99969 163 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 PEF1Q9UBV8 284 aaKnown RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 H3BQ15 152 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 IFNL4K9M1U5 179 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 PPYP01298 95 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 RPL8P62917 257 aaKnown RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 ZNF275Q9NSD4 429 aaPredicted RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
AFF3-201ENST00000317233 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
AFF3-201ENST00000317233 CTAG2O75638 210 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 OR8D4Q8NGM9 314 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 LRRC61Q9BV99 259 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
AFF3-201ENST00000317233 HMGA2P52926 109 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 COL10A1Q03692 680 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 FLRT3Q9NZU0 649 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 HAPLN4Q86UW8 402 aa11.5□□□□□ -0.57
AFF3-201ENST00000317233 WDR34Q96EX3 536 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms