RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ACP7Q6ZNF0 438 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 ZNF645Q8N7E2 425 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 UBALD1Q8TB05 177 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 NINJ1Q92982 152 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 BIN3Q9NQY0 253 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 KIAA2026Q5HYC2 2103 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 C7orf77A4D0Y5 90 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 COLCA2A8K830 154 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 FAM90A26D6RGX4 464 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 GPR37O15354 613 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 NDUFA2O43678 99 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 PSPNO60542 156 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 IGKV1-5P01602 117 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 CRYAAP02489 173 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 CRYBA1P05813 215 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 OR3A1P47881 315 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 TMEM267Q0VDI3 215 aaPredicted RBP11.86□□□□□ -0.51
VRK3-201ENST00000316763 SMIM21Q3B7S5 101 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 SPSB3Q6PJ21 355 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 Q6ZRM9 215 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 C11orf53Q8IXP5 236 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 RBMXL1Q96E39 390 aaKnown RBP11.86□□□□□ -0.51
VRK3-201ENST00000316763 C14orf79Q96F83 325 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 RFNGQ9Y644 331 aa11.86□□□□□ -0.51
VRK3-201ENST00000316763 HCFC1P51610 2035 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 MEX3AA1L020 520 aaKnown RBP11.85□□□□□ -0.51
VRK3-201ENST00000316763 H3BP45 60 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 J3QKU1 62 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 IFNL4K9M1U5 179 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 THBDP07204 575 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 FOLR2P14207 255 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 AGAP20933 346 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
VRK3-201ENST00000316763 NKX6-1P78426 367 aaPredicted RBP11.85□□□□□ -0.51
VRK3-201ENST00000316763 RUNX1Q01196 453 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.51
VRK3-201ENST00000316763 CATR1Q13166 79 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 MSMO1Q15800 293 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 IZUMO4Q1ZYL8 232 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 ALKBH2Q6NS38 261 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 THNSL2Q86YJ6 484 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 ZNF808Q8N4W9 903 aaPredicted RBP11.85□□□□□ -0.51
VRK3-201ENST00000316763 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 ABHD14AQ9BUJ0 271 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 COA4Q9NYJ1 87 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 RNF150Q9ULK6 438 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 MMP24Q9Y5R2 645 aa11.85□□□□□ -0.51
VRK3-201ENST00000316763 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 WNT9BO14905 357 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 IAPPP10997 89 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 CD40P25942 277 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 FABP6P51161 128 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 WDR82Q6UXN9 313 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 CLCC1Q96S66 551 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 RARRES2Q99969 163 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 TOLLIPQ9H0E2 274 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 HIPK2Q9H2X6 1198 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 MYO18BQ8IUG5 2567 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 SPTBN1Q01082 2364 aaKnown RBP11.84□□□□□ -0.51
VRK3-201ENST00000316763 FLNCQ14315 2725 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
VRK3-201ENST00000316763 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 HBZP02008 142 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 MT-ND4LP03901 98 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 GABRA2P47869 451 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 RAB5BP61020 215 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 CCL20P78556 96 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 AESQ08117 197 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 TRAT1Q6PIZ9 186 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 ZNF295-AS1Q8N0V1 137 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 FGFRL1Q8N441 504 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 SFT2D1Q8WV19 159 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 EGLN1Q9GZT9 426 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 OR2D2Q9H210 308 aa11.84□□□□□ -0.51
VRK3-201ENST00000316763 CLDN14O95500 239 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 OR8U8P0C7N1 319 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 RNF224P0DH78 156 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 PTAFRP25105 342 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 GLRXP35754 106 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 AKR1C3P42330 323 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 RNF212Q495C1 297 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 KRBOX4Q5JUW0 171 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 TMEM108Q6UXF1 575 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 ETV3LQ6ZN32 361 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 LILRB2Q8N423 598 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 LURAP1Q96LR2 239 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 WFIKKN1Q96NZ8 548 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 PSMG3Q9BT73 122 aaPredicted RBP11.83□□□□□ -0.52
VRK3-201ENST00000316763 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.52
VRK3-201ENST00000316763 KLF2Q9Y5W3 355 aaPredicted RBP11.83□□□□□ -0.52
VRK3-201ENST00000316763 TRAV1-1A0A0B4J248 108 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 METTL15P1P0C7V9 234 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms