RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PRRG2O14669 202 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 RRP8O43159 456 aaKnown RBP6.4□□□□□ -1.38
TRIM55-202ENST00000315962 PTBP3O95758 552 aaKnown RBP6.4□□□□□ -1.38
TRIM55-202ENST00000315962 CRYABP02511 175 aaKnown RBP6.4□□□□□ -1.38
TRIM55-202ENST00000315962 CD55P08174 381 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 SEC11BP0C7V7 166 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 C1QTNF9P0C862 333 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF16P17020 682 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-202ENST00000315962 GNRHRP30968 328 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 DEFA6Q01524 100 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 GNMTQ14749 295 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 ELOBQ15370 118 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 KHDC3LQ587J8 217 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 LYPD6BQ8NI32 183 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 PLPPR1Q8TBJ4 325 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 BOD1Q96IK1 185 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 NUDT16L1Q9BRJ7 211 aaKnown RBP6.4□□□□□ -1.38
TRIM55-202ENST00000315962 GINS3Q9BRX5 216 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 PBDC1Q9BVG4 233 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 PLEKHA2Q9HB19 425 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF286AQ9HBT8 521 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 TRAPPC2LQ9UL33 140 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 RBM7Q9Y580 266 aaKnown RBP6.4□□□□□ -1.38
TRIM55-202ENST00000315962 MPC1Q9Y5U8 109 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 SLC25A15Q9Y619 301 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 CACNA1BQ00975 2339 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV3-43A0A0B4J1X8 118 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 TRGV8A0A0C4DH27 118 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 K7ENP7 123 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 HSPA12AO43301 675 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 SCAF4O95104 1147 aaKnown RBP6.4□□□□□ -1.39
TRIM55-202ENST00000315962 PPYP01298 95 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 IGHV3-43DP0DP04 118 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 IAPPP10997 89 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 NKX2-1P43699 371 aaPredicted RBP6.4□□□□□ -1.39
TRIM55-202ENST00000315962 RPL23AP62750 156 aaKnown RBP6.4□□□□□ -1.39
TRIM55-202ENST00000315962 LY6DQ14210 128 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 TBC1D26Q86UD7 250 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF695Q8IW36 515 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 LGI3Q8N145 548 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 FRZBQ92765 325 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 TMEM68Q96MH6 324 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF665Q9H7R5 613 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 CCL28Q9NRJ3 127 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 ERRFI1Q9UJM3 462 aaPredicted RBP6.4□□□□□ -1.39
TRIM55-202ENST00000315962 WASF3Q9UPY6 502 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 WSB1Q9Y6I7 421 aa6.4□□□□□ -1.39
TRIM55-202ENST00000315962 A0A0G2JRQ6 117 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 C3orf85A0A1B0GTC6 90 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 CRYAAP02489 173 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 PGA5P0DJD9 388 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 RAC2P15153 192 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 ELLP55199 621 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 VAMP2P63027 116 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 CCL8P80075 99 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF818PQ6ZRF7 136 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 THNSL2Q86YJ6 484 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 GAPTQ8N292 157 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 ZNRF1Q8ND25 227 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 OR8G5Q8NG78 346 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 FAM57AQ8TBR7 257 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 CA5BP1Q8WTZ4 195 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 GAR1Q9NY12 217 aaKnown RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 A8MXE2 369 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 TK1P04183 234 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 SNRPCP09234 159 aaKnown RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 TRGC1P0CF51 173 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 GABRA2P47869 451 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 RAB5CP51148 216 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 ICAM4Q14773 271 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 P2RY6Q15077 328 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 RHEBQ15382 184 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 PRSS8Q16651 343 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 CYB5R2Q6BCY4 276 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 DUX4L9Q6RFH8 374 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 SSX7Q7RTT5 188 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 STX12Q86Y82 276 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 ODF3L1Q8IXM7 274 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 C11orf53Q8IXP5 236 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 TMEM252Q8N6L7 170 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 C18orf12Q96KH6 178 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 UNKLQ9H9P5 680 aaKnown RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 Q9N2K0 584 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 AURKAIP1Q9NWT8 199 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 PPP1R3CQ9UQK1 317 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 SPG11Q96JI7 2443 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 EPG5Q9HCE0 2579 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 OR5B21A6NL26 309 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 J3QT63 122 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 CHST1O43916 411 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 SRP19P09132 144 aaKnown RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 NDUFB7P17568 137 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 HOXA5P20719 270 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 CCKARP32238 428 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 NKX6-1P78426 367 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 IL24Q13007 206 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF718Q3SXZ3 478 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 GPR157Q5UAW9 335 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms