RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ZNF610Q8N9Z0 462 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 SLC25A22Q9H936 323 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 CCL11P51671 97 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 VWA1Q6PCB0 445 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 COQ2Q96H96 371 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 ODAMA1E959 279 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 TMEM41BQ5BJD5 291 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 ACSM6Q6P461 480 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 MBD3L1Q8WWY6 194 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 GMPPAQ96IJ6 420 aaPredicted RBP21.25■□□□□ 0.99
HOXB3-201ENST00000311626 TMEM30CPA0ZSE6 113 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 NKX2-8O15522 239 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BKO60814 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 ZG16O60844 167 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BJP06899 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 RAC2P15153 192 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HOXA5P20719 270 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BOP23527 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BBP33778 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BDP58876 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BCP62807 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 GABRA6Q16445 453 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST2H2BEQ16778 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.25■□□□□ 0.99
HOXB3-201ENST00000311626 ZNF645Q8N7E2 425 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BHQ93079 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 LHX4Q969G2 390 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BNQ99877 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 HIST1H2BMQ99879 126 aa21.25■□□□□ 0.99
HOXB3-201ENST00000311626 IQCF6A8MYZ5 107 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 RBMXL2O75526 392 aaKnown RBP21.24■□□□□ 0.99
HOXB3-201ENST00000311626 PTBP3O95758 552 aaKnown RBP21.24■□□□□ 0.99
HOXB3-201ENST00000311626 IGHV3-13P01766 116 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 IGHV3-7P01780 117 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 SLC39A9Q9NUM3 307 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 TRAV20A0A0B4J274 112 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 ZNF737O75373 536 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 PSMG3Q9BT73 122 aaPredicted RBP21.24■□□□□ 0.99
HOXB3-201ENST00000311626 ZDHHC11Q9H8X9 412 aa21.24■□□□□ 0.99
HOXB3-201ENST00000311626 TGFBR3Q03167 851 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 TFF3Q07654 80 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 EDARADDQ8WWZ3 215 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 GGACTQ9BVM4 153 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 TOLLIPQ9H0E2 274 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 LAMA5O15230 3695 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 ST8SIA5O15466 376 aa21.23■□□□□ 0.99
HOXB3-201ENST00000311626 WNT2P09544 360 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 HOXB1P14653 301 aaPredicted RBP21.22■□□□□ 0.99
HOXB3-201ENST00000311626 CLEC12BQ2HXU8 276 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 TMEM14EPQ6UXP3 125 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 NECAP1Q8NC96 275 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 OR13A1Q8NGR1 328 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 EDDM3AQ14507 147 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 RPUSD4Q96CM3 377 aaKnown RBP21.22■□□□□ 0.99
HOXB3-201ENST00000311626 FAM210BQ96KR6 192 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 TCEAL7Q9BRU2 100 aa21.22■□□□□ 0.99
HOXB3-201ENST00000311626 LINC00473A8K010 186 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 BMP5P22003 454 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 HIPK2Q9H2X6 1198 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 SDF2L1Q9HCN8 221 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 HEATR1Q9H583 2144 aaKnown RBP21.21■□□□□ 0.99
HOXB3-201ENST00000311626 TIMM8AO60220 97 aaPredicted RBP21.21■□□□□ 0.99
HOXB3-201ENST00000311626 TNFSF10P50591 281 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 SERF2P84101 59 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 COL10A1Q03692 680 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 FOXF2Q12947 444 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 PLA2G2CQ5R387 149 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 ABHD5Q8WTS1 349 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 FRZBQ92765 325 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 SIRT7Q9NRC8 400 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 VAX2Q9UIW0 290 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 PSG11Q9UQ72 335 aa21.21■□□□□ 0.99
HOXB3-201ENST00000311626 LRRC30A6NM36 301 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 CD81P60033 236 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 ADIRFQ15847 76 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 Q3ZCU0 254 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 FAM214BQ7L5A3 538 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 TMEM178AQ8NBL3 297 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 NINJ1Q92982 152 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 FAM234AQ9H0X4 552 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 HSPB7Q9UBY9 170 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 PYY3Q5JQD4 70 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 GPR61Q9BZJ8 451 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 OR51M1Q9H341 326 aa21.2■□□□□ 0.98
HOXB3-201ENST00000311626 RNF212BA8MTL3 300 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 M0R296 226 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 SOD3P08294 240 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 FGF7P21781 194 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 CDX1P47902 265 aaPredicted RBP21.19■□□□□ 0.98
HOXB3-201ENST00000311626 WDR25Q64LD2 544 aaPredicted RBP21.19■□□□□ 0.98
HOXB3-201ENST00000311626 WDR82Q6UXN9 313 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 ACP7Q6ZNF0 438 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 WDR31Q8NA23 367 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 HES4Q9HCC6 221 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 CLCF1Q9UBD9 225 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 TRGC1P0CF51 173 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 MRGPRGQ86SM5 289 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 C9orf106Q8NAJ2 232 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 FDCSPQ8NFU4 85 aa21.19■□□□□ 0.98
HOXB3-201ENST00000311626 OR10G4Q8NGN3 311 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms