RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NKX2-8O15522 239 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 GYPAP02724 150 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 CELA3BP08861 270 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 MEOX1P50221 254 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 ERVFC1-1P60608 527 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 VAMP3Q15836 100 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 SSX7Q7RTT5 188 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 SLC35E3Q7Z769 313 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 FAM58AQ8N1B3 248 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 DEFB108BQ8NET1 73 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
RETREG3-201ENST00000309428 GUCD1Q96NT3 240 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 HSPB9Q9BQS6 159 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 NAT8BQ9UHF3 227 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 PROB1E7EW31 1015 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 CDIPTO14735 213 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 WISP2O76076 250 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 NDUFB4O95168 129 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 G6PCP35575 357 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 GATAD1Q8WUU5 269 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 C1orf147Q96MC9 270 aaPredicted RBP10.82□□□□□ -0.68
RETREG3-201ENST00000309428 COL12A1Q99715 3063 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 LSM6P62312 80 aaKnown RBP10.81□□□□□ -0.68
RETREG3-201ENST00000309428 QRFPP83859 136 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 MEF2BQ02080 365 aaPredicted RBP10.81□□□□□ -0.68
RETREG3-201ENST00000309428 FAM27BQ5VT28 67 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 LHFPL1Q86WI0 220 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 TMEM251Q8N6I4 163 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 DEFB124Q8NES8 71 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 OR51G1Q8NGK1 321 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 DTD1Q8TEA8 209 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 NABP1Q96AH0 204 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 UHRF2Q96PU4 802 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 LYRM2Q9NU23 88 aaPredicted RBP10.81□□□□□ -0.68
RETREG3-201ENST00000309428 LRP4O75096 1905 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 PRAMEF5Q5TYX0 476 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 PRAMEF6Q5VXH4 476 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 OR2M7Q8NG81 312 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 RAB40CQ96S21 281 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 CEP192Q8TEP8 1941 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 IGKV1D-13A0A0B4J2D9 117 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 EREGO14944 169 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 IGHV2-5P01817 119 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 IGKV1-13P0DP09 117 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 IER3P46695 156 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 CNN1P51911 297 aaKnown RBP10.81□□□□□ -0.68
RETREG3-201ENST00000309428 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
RETREG3-201ENST00000309428 DCAF10Q5QP82 559 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 DNM1P46Q6ZS02 220 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 TCF23Q7RTU1 214 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 MRGPRGQ86SM5 289 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 SELENOHQ8IZQ5 122 aaKnown RBP10.81□□□□□ -0.68
RETREG3-201ENST00000309428 FADS6Q8N9I5 356 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 ABHD5Q8WTS1 349 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 MOB3AQ96BX8 217 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 RNF122Q9H9V4 155 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 CDH20Q9HBT6 801 aa10.81□□□□□ -0.68
RETREG3-201ENST00000309428 TRAV38-1A0A0B4J264 116 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CRISP2P16562 243 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 ACOT6Q3I5F7 207 aaPredicted RBP10.8□□□□□ -0.68
RETREG3-201ENST00000309428 PRR31Q5SQ13 230 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 ACSM6Q6P461 480 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 NEIL1Q96FI4 390 aaPredicted RBP10.8□□□□□ -0.68
RETREG3-201ENST00000309428 TTTY12Q9BZ98 90 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CHRNA10Q9GZZ6 450 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 PARLQ9H300 379 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 SELENOKQ9Y6D0 94 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 NUP210LQ5VU65 1888 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 ZNF503-AS2A6NEH8 195 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 C9orf172C9J069 976 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 OR7C2O60412 319 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 AMBPP02760 352 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 OR4A8P0C604 315 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 HERPUD1Q15011 391 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 MRPL54Q6P161 138 aaKnown RBP10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CLDND2Q8NHS1 167 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CHD3Q12873 2000 aaKnown RBP10.8□□□□□ -0.68
RETREG3-201ENST00000309428 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
RETREG3-201ENST00000309428 RBM11P57052 281 aaKnown RBP10.8□□□□□ -0.68
RETREG3-201ENST00000309428 ERVK-16P61578 105 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CATR1Q13166 79 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 Q6ZN92 141 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 UBALD2Q8IYN6 164 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CARFQ8N187 725 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 ZNF664Q8N3J9 261 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 CACNA1AO00555 2505 aa10.8□□□□□ -0.68
RETREG3-201ENST00000309428 F2RP25116 425 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 H1FOOQ8IZA3 346 aaPredicted RBP10.79□□□□□ -0.68
RETREG3-201ENST00000309428 C11orf42Q8N5U0 333 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 GTF3AQ92664 365 aaKnown RBP10.79□□□□□ -0.68
RETREG3-201ENST00000309428 OR2J1Q9GZK6 312 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 SEBOXQ9HB31 216 aaPredicted RBP10.79□□□□□ -0.68
RETREG3-201ENST00000309428 TUBD1Q9UJT1 453 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 S100A7P31151 101 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms