RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 BTNL3Q6UXE8 466 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 HEPN1Q6WQI6 88 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 LYZL2Q7Z4W2 148 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 C11orf42Q8N5U0 333 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 OR52M1Q8NGK5 317 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 CT45A3Q8NHU0 189 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 C8orf46Q8TAG6 207 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 EDARADDQ8WWZ3 215 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 GAL3ST2Q9H3Q3 398 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 RAB9BQ9NP90 201 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 SDHAF2Q9NX18 166 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 ZNRD1Q9P1U0 126 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 AKAP6Q13023 2319 aa5.71□□□□□ -1.5
PTCD2-201ENST00000308077 TLN2Q9Y4G6 2542 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 TRBV23-1A0A0A0MS06 115 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 TRAV14DV4A0A0A6YYC5 116 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 C13orf42A0A1B0GVH6 325 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ITGB1BP1O14713 200 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 RGS11O94810 467 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 CD99P14209 185 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 DNASE1P24855 282 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 GNG10P50151 68 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 BRWD1-AS2P59051 145 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 LINC00205P59089 165 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 MSMO1Q15800 293 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 TMEM30BQ3MIR4 351 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 Q3ZCU0 254 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 LGALSLQ3ZCW2 172 aaPredicted RBP5.7□□□□□ -1.5
PTCD2-201ENST00000308077 RPL39P5Q59GN2 51 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 GGNBP1Q5YKI7 109 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 GSG1LQ6UXU4 331 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 FAM219AQ8IW50 185 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ODF3L1Q8IXM7 274 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 SELENOHQ8IZQ5 122 aaKnown RBP5.7□□□□□ -1.5
PTCD2-201ENST00000308077 LGI3Q8N145 548 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ZBTB34Q8NCN2 500 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 OR10A7Q8NGE5 316 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 TMEM56Q96MV1 263 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ABHD14AQ9BUJ0 271 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 PDCD10Q9BUL8 212 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 BPESC1Q9GZL8 116 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 METTL8Q9H825 291 aaKnown RBP5.7□□□□□ -1.5
PTCD2-201ENST00000308077 TMEM56-RWDD3S4R434 201 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 MALRD1Q5VYJ5 2156 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ARHGAP32A7KAX9 2087 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 C5orf51A6NDU8 294 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 LINC00473A8K010 186 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 C17orf98A8MV24 154 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 CDS2O95674 445 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 IGKV1-39P01597 117 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 IGHV2-5P01817 119 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 IGKV1D-39P04432 117 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 S100GP29377 79 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 GPR12P47775 334 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 DLX1P56177 255 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF585BQ52M93 769 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 PDLIM3Q53GG5 364 aaPredicted RBP5.7□□□□□ -1.5
PTCD2-201ENST00000308077 TMEM268Q5VZI3 342 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 SLC25A48Q6ZT89 311 aaKnown RBP5.7□□□□□ -1.5
PTCD2-201ENST00000308077 SLC35G3Q8N808 338 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 LY6G5BQ8NDX9 201 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 FAM216AQ8WUB2 273 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 ASB13Q8WXK3 278 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 RANBP3Q9H6Z4 567 aaPredicted RBP5.7□□□□□ -1.5
PTCD2-201ENST00000308077 HSPB11Q9Y547 144 aa5.7□□□□□ -1.5
PTCD2-201ENST00000308077 SAA2-SAA4A0A096LPE2 208 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 PPIAL4CA0A0B4J2A2 164 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 SAA2P0DJI9 122 aaPredicted RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 PPIAL4GP0DN37 164 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 IGHV1-8P0DP01 117 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 CXCL2P19875 107 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 SSTR2P30874 369 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 DUTP33316 252 aaKnown RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 PDLIM4P50479 330 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 RAB7AP51149 207 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 KRTAP10-9P60411 292 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 GNB2P62879 340 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 IL15RAQ13261 267 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 PPP1R1CQ8WVI7 109 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 C2orf50Q96LR7 162 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 HYLS1Q96M11 299 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF251Q9BRH9 671 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 SSBP3Q9BWW4 388 aaPredicted RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 NMES1Q9C002 83 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 LIN7CQ9NUP9 197 aaKnown RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 A0A0G2JRQ6 117 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 RAMP3O60896 148 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 B3GALNT1O75752 331 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 ZFP36P26651 326 aaKnown RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 ATP5J2P56134 94 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 LMO4P61968 165 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 SRPXP78539 464 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 PRB3Q04118 309 aaPredicted RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 IAH1Q2TAA2 248 aaPredicted RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 LRRC37A5PQ49AS3 106 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 OR2B11Q5JQS5 317 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 NCR3LG1Q68D85 454 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF66Q6ZN08 573 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF695Q8IW36 515 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 LYG1Q8N1E2 194 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms