RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CD3EP07766 207 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 SMIM6P0DI80 62 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 FABP2P12104 132 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 ZFP64Q9NPA5 681 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 A6NNC1 897 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 TMEM177Q53S58 311 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 AMMECR1LQ6DCA0 310 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 LHX9Q9NQ69 397 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 COL16A1Q07092 1604 aaPredicted RBP10.94□□□□□ -0.66
USP38-201ENST00000307017 PITX3O75364 302 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 AMY1AP04745 511 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 HIST1H1EP10412 219 aaKnown RBP10.94□□□□□ -0.66
USP38-201ENST00000307017 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 IGHV4-39P01824 125 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 MAS1LP35410 378 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 IL11RAQ14626 422 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 SSPNQ14714 243 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 GLMPQ8WWB7 406 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 HBZP02008 142 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 TNFSF18Q9UNG2 199 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 IGHV3-64A0A075B6Q5 118 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 BRS3P32247 399 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 CDCP2Q5VXM1 449 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 LSM10Q969L4 123 aaKnown RBP10.94□□□□□ -0.66
USP38-201ENST00000307017 METTL26Q96S19 204 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
USP38-201ENST00000307017 DNAJC13O75165 2243 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 IGHV5-10-1A0A0J9YXX1 117 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 MTCL1Q9Y4B5 1905 aaKnown RBP10.93□□□□□ -0.66
USP38-201ENST00000307017 RPL36A-HNRNPH2H7BZ11 118 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 TRGC1P0CF51 173 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 NPBWR2P48146 333 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
USP38-201ENST00000307017 BHLHA9Q7RTU4 235 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 HSPB7Q9UBY9 170 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 ARFGEF1Q9Y6D6 1849 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 PAPPAQ13219 1627 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 TMEM210A6NLX4 147 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 ZNF56Q15929 161 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 OR2V2Q96R30 315 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 TDRD15B5MCY1 1934 aaKnown RBP10.93□□□□□ -0.66
USP38-201ENST00000307017 LINC00869P0C866 280 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 ZNF362Q5T0B9 420 aaPredicted RBP10.93□□□□□ -0.66
USP38-201ENST00000307017 TMEM136Q6ZRR5 245 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 MRGPRGQ86SM5 289 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 GGACTQ9BVM4 153 aa10.93□□□□□ -0.66
USP38-201ENST00000307017 POLR2AP24928 1970 aaKnown RBP10.93□□□□□ -0.66
USP38-201ENST00000307017 MPTX1A8MV57 137 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 SAA1P0DJI8 122 aaPredicted RBP10.92□□□□□ -0.66
USP38-201ENST00000307017 TCF23Q7RTU1 214 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 TMEM174Q8WUU8 243 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 THYN1Q9P016 225 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 CISD3P0C7P0 127 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 LGALS3P17931 250 aaKnown RBP10.92□□□□□ -0.66
USP38-201ENST00000307017 UNC119Q13432 240 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 PKD1L3Q7Z443 1732 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 OR6X1Q8NH79 312 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 MYOFQ9NZM1 2061 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 PRDX2P32119 198 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 CRYBA2P53672 197 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 NRIP2Q9BQI9 281 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 A0A1W2PPC1 479 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 TMEM38BQ9NVV0 291 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 KNL1Q8NG31 2342 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
USP38-201ENST00000307017 OR2H2O95918 312 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 FAM201AQ5SY85 155 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 ZNF660Q6AZW8 331 aaPredicted RBP10.92□□□□□ -0.66
USP38-201ENST00000307017 OR4D5Q8NGN0 318 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 MVB12AQ96EY5 273 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 QTRT1Q9BXR0 403 aaKnown RBP10.92□□□□□ -0.66
USP38-201ENST00000307017 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 A0A1B0GU03 582 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 FCARP24071 287 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 SUMO3P55854 103 aaPredicted RBP10.92□□□□□ -0.66
USP38-201ENST00000307017 CX3CL1P78423 397 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 P2RY6Q15077 328 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 RNF7Q9UBF6 113 aa10.92□□□□□ -0.66
USP38-201ENST00000307017 RBFOX2O43251 390 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP38-201ENST00000307017 BGLAPP02818 100 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 DDTP30046 118 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 RPL31P62899 125 aaKnown RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 IFITM2Q01629 132 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 C1orf210Q8IVY1 113 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 ZNF831Q5JPB2 1677 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 BCL2P10415 239 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 ALX4Q9H161 411 aaPredicted RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 M0QZK8 103 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 CCL21O00585 134 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 RRHO14718 337 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 GGCTO75223 188 aaKnown RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 H2BFSP57053 126 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 APOBEC4Q8WW27 367 aaKnown RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 NAA38Q9BRA0 125 aaKnown RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 LINC00862A6NCI5 91 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 NGFRP08138 427 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms