RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 VDAC2P45880 294 aaPredicted RBP8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 IL18Q14116 193 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 CDK10Q15131 360 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 ABCA11PQ4W5N1 156 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 RNASE12Q5GAN4 147 aaKnown RBP8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 C9orf152Q5JTZ5 239 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 C11orf88Q6PI97 169 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 OR5AP2Q8NGF4 316 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 OR8H1Q8NGG4 311 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 OR5H2Q8NGV7 314 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 EAF1Q96JC9 268 aaPredicted RBP8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 EHFQ9NZC4 300 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 RABL2AQ9UBK7 228 aaPredicted RBP8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 RABL2BQ9UNT1 228 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 OR2W1Q9Y3N9 320 aa8.79□□□□□ -1
CSPG4P1Y-201ENST00000306641 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ATRQ13535 2644 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 CTDSP2O14595 271 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 TPPPO94811 219 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 OR5H8P0DN80 308 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 MC5RP33032 325 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 S100A5P33763 92 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ACTBP60709 375 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 HERV-K104P61576 105 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 MRPS10P82664 201 aaKnown RBP8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 EBI3Q14213 229 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 MMDQ15546 238 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 FBLN7Q53RD9 439 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 FAM131AQ6UXB0 335 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 GLDNQ6ZMI3 551 aaPredicted RBP8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ZNF645Q8N7E2 425 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 GPX8Q8TED1 209 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 SNAPC3Q92966 411 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 RASL11BQ9BPW5 248 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ZNF251Q9BRH9 671 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 SLIRPQ9GZT3 109 aaKnown RBP8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 MIXL1Q9H2W2 232 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ZNF702PQ9H963 129 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 SDHAF2Q9NX18 166 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 KIAA1456Q9P272 454 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ANAPC10Q9UM13 185 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 WASHC3Q9Y3C0 194 aa8.78□□□□□ -1
CSPG4P1Y-201ENST00000306641 ZNF736B4DX44 427 aaPredicted RBP8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 H0YJW9 148 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PMP2P02689 132 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CT45A6P0DMU7 189 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CT45A5P0DMU8 189 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CT45A7P0DMV0 189 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FCGR2CP31995 323 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 THBS3P49746 956 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FXYD4P59646 89 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 BLCAPP62952 87 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TAGLNQ01995 201 aaKnown RBP8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ACTBL2Q562R1 376 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PYHIN1Q6K0P9 492 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SHISA2Q6UWI4 295 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 C5orf56Q8N8D9 126 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SECTM1Q8WVN6 248 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FCAMRQ8WWV6 532 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 WFDC12Q8WWY7 111 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ADTRPQ96IZ2 230 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ZNF747Q9BV97 191 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SLC35D1Q9NTN3 355 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 GAB2Q9UQC2 676 aa8.77□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 NBR2O15453 112 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RBBP9O75884 186 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PPYP01298 95 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 VSIG10L2P0DP72 767 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RRASP10301 218 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 NAT1P18440 290 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 AADACP22760 399 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 HLA-DMAP28067 261 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 HRH1P35367 487 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PROK1P58294 105 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TSPAN5P62079 268 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PLGLAQ15195 96 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RTL8BQ17RB0 113 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 KCTD9Q7L273 389 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TMEM17Q86X19 198 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PDPNQ86YL7 162 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 Q8N2B8 174 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 Q8N6K4 173 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 KLHDC1Q8N7A1 406 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DRAXINQ8NBI3 349 aaPredicted RBP8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OR5AN1Q8NGI8 311 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 BORCS5Q969J3 196 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 NXF2Q9GZY0 626 aaKnown RBP8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 MMP27Q9H306 513 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 LIN7CQ9NUP9 197 aaKnown RBP8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 IGKV1D-13A0A0B4J2D9 117 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SH2D7A6NKC9 451 aaPredicted RBP8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 GABARAPH6UMI1 98 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 KCNAB3O43448 404 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TUSC2O75896 110 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 IGKV1-13P0DP09 117 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RFX2P48378 723 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RPS16P62249 146 aaKnown RBP8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DYRK1AQ13627 763 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms