RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MPZL1O95297 269 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 ACVR1Q04771 509 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 C9orf62Q8N4C0 152 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 IGKV6-21A0A0C4DH24 114 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 TNFSF10P50591 281 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 OR52M1Q8NGK5 317 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 ST6GALNAC6Q969X2 333 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 SCNM1Q9BWG6 230 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 WNT10AQ9GZT5 417 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 A0A0B4J2E0 115 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 A0A1B0GX12 115 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 PRICKLE4Q2TBC4 344 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 TMEM211Q6ICI0 200 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 MRPL24Q96A35 216 aaKnown RBP11.72□□□□□ -0.53
TRIM56-201ENST00000306085 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 VSIG10L2P0DP72 767 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 MUC1P15941 1255 aaPredicted RBP11.72□□□□□ -0.53
TRIM56-201ENST00000306085 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 CCDC144NLQ6NUI1 221 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 WFDC5Q8TCV5 224 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 MED13Q9UHV7 2174 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 CDIPTO14735 213 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 AGFG2O95081 481 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 HCP5Q6MZN7 132 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 OVCH2Q7RTZ1 564 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 MRGPRX1Q96LB2 322 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF48Q96MX3 618 aaPredicted RBP11.71□□□□□ -0.53
TRIM56-201ENST00000306085 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 ASPDHA6ND91 283 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 FAM53BQ14153 422 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 BCL2L10Q9HD36 194 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 ETHE1O95571 254 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 EML2O95834 649 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
TRIM56-201ENST00000306085 TDGF1P13385 188 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 CDKN2AP42771 156 aaKnown RBP11.71□□□□□ -0.53
TRIM56-201ENST00000306085 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.53
TRIM56-201ENST00000306085 AMER3Q8N944 861 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 NT5CQ8TCD5 201 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 TMEM45BQ96B21 275 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 R4GN57 208 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 TNCP24821 2201 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 KIR3DL3Q8N743 410 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 MVB12AQ96EY5 273 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 DOCK2Q92608 1830 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 K7N7A8 449 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 GBF1Q92538 1859 aa11.71□□□□□ -0.54
TRIM56-201ENST00000306085 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
TRIM56-201ENST00000306085 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 TRGC1P0CF51 173 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 MEF2BQ02080 365 aaPredicted RBP11.7□□□□□ -0.54
TRIM56-201ENST00000306085 STPG3Q8N7X2 389 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 STARD6P59095 220 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 LAMTOR1Q6IAA8 161 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SYT11Q9BT88 431 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 TUBA4BQ9H853 241 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SIGLEC7Q9Y286 467 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 LINC00869P0C866 280 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SIGLEC5O15389 551 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SOCS1O15524 211 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 EIF3GO75821 320 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SIGLEC14Q08ET2 396 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 SPINK14Q6IE38 97 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 C17orf47Q8NEP4 570 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 OR11H7Q8NGC8 314 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 ASB1Q9Y576 335 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 DMRT1Q9Y5R6 373 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 C9JCJ5 164 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 KLKB1P03952 638 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 COL1A1P02452 1464 aaPredicted RBP11.7□□□□□ -0.54
TRIM56-201ENST00000306085 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 LINC00518Q8N0U6 118 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 WDR34Q96EX3 536 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 WDFY2Q96P53 400 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 CTSVO60911 334 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 PTP4A1Q93096 173 aa11.7□□□□□ -0.54
TRIM56-201ENST00000306085 CEACAM4O75871 244 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 HOXA5P20719 270 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 EFNB2P52799 333 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 RUNX1Q01196 453 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 PLPP3O14495 311 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 PSG9Q00887 426 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 SRSF6Q13247 344 aaKnown RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms