RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ZGRF1Q86YA3 2104 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 PRRG2O14669 202 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 DHHO43323 396 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 TNFSF13O75888 250 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 GYPAP02724 150 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 FAHP16930 419 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 AMTP48728 403 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 GNB2P62879 340 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 RIPPLY2Q5TAB7 128 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 CDH20Q9HBT6 801 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 CDS2O95674 445 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 MALLQ13021 153 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 BATF2Q8N1L9 274 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 LIPHQ8WWY8 451 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 TMEM106BQ9NUM4 274 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 BMP5P22003 454 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 DTYMKP23919 212 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 TGFBR3Q03167 851 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 MDS2Q8NDY4 140 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 OR56B2PQ8NGI1 322 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 BORCS8Q96FH0 119 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 SRXN1Q9BYN0 137 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 OR6C3Q9NZP0 311 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 B3GAT1Q9P2W7 334 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 ZNHIT1O43257 154 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 DNPH1O43598 174 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 IL18BPO95998 194 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 UBE2NP61088 152 aaKnown RBP9.33□□□□□ -0.92
LSM3-201ENST00000306024 BAXQ07812 192 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 ZP4Q12836 540 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 GFRALQ6UXV0 394 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 RNF144BQ7Z419 303 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 OR51H1Q8NH63 302 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 NUDT16L1Q9BRJ7 211 aaKnown RBP9.33□□□□□ -0.92
LSM3-201ENST00000306024 PIGLQ9Y2B2 252 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 ROS1P08922 2347 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 A0A1B0GUS0 222 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 PAFAH1B2P68402 229 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 MEF2BQ02080 365 aaPredicted RBP9.33□□□□□ -0.92
LSM3-201ENST00000306024 PDCD1Q15116 288 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 CEACAM16Q2WEN9 425 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 ERASQ7Z444 233 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 TCTEX1D1Q8N7M0 179 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 MOB3AQ96BX8 217 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 MYO7BQ6PIF6 2116 aa9.33□□□□□ -0.92
LSM3-201ENST00000306024 TRDCB7Z8K6 153 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 MSR1P21757 451 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 CEACAM8P31997 349 aaPredicted RBP9.32□□□□□ -0.92
LSM3-201ENST00000306024 MDH2P40926 338 aaKnown RBP9.32□□□□□ -0.92
LSM3-201ENST00000306024 TUSC5Q8IXB3 177 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 OR8B12Q8NGG6 310 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 RNF133Q8WVZ7 376 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 P2RX4Q99571 388 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 MOB1AQ9H8S9 216 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 ATRXP46100 2492 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 IGKV1D-8A0A087WSZ0 117 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 KIAA1324LA8MWY0 1029 aaPredicted RBP9.32□□□□□ -0.92
LSM3-201ENST00000306024 B4GALT1P15291 398 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 UBE2G2P60604 165 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 AARDQ4LEZ3 155 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 CYP2G1PQ6ZSU1 146 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 SF3B5Q9BWJ5 86 aaKnown RBP9.32□□□□□ -0.92
LSM3-201ENST00000306024 LAMTOR2Q9Y2Q5 125 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 EML6Q6ZMW3 1958 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 A0A096LPE4 126 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 A0A1W2PPZ6 126 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 GABRA2P47869 451 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 RNPS1Q15287 305 aaKnown RBP9.32□□□□□ -0.92
LSM3-201ENST00000306024 PRR27Q6MZM9 219 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 CALHM1Q8IU99 346 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 SLC35D1Q9NTN3 355 aa9.32□□□□□ -0.92
LSM3-201ENST00000306024 PHF3Q92576 2039 aaKnown RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 NUP210LQ5VU65 1888 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 ZNF814B7Z6K7 855 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 MPPED1O15442 326 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 SPRY1O43609 319 aaPredicted RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 TRAF3IP2O43734 574 aaPredicted RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 KBTBD11O94819 623 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 OR51G1Q8NGK1 321 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 SGMS2Q8NHU3 365 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 PINX1Q96BK5 328 aaKnown RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 GPHA2Q96T91 129 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 PARLQ9H300 379 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 ICE1Q9Y2F5 2266 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 CEACAM18A8MTB9 384 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 ZNF732B4DXR9 585 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 K7ERU9 68 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 FCN1O00602 326 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 TOX4O94842 621 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 RAB35Q15286 201 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 LDLRAD2Q5SZI1 272 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms