RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FOXI3A8MTJ6 420 aaPredicted RBP11.13□□□□□ -0.63
TRIM35-201ENST00000305364 PDE6DO43924 150 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 ZNF253O75346 499 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 DEFA4P12838 97 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 CHRNB4P30926 498 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 GABRA2P47869 451 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 WDYHV1Q96HA8 205 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
TRIM35-201ENST00000305364 R4GN57 208 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 LAMA3Q16787 3333 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 A0A0G2JRQ6 117 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 IFNL4K9M1U5 179 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 SYNGR1O43759 233 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 LCN2P80188 198 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 MIEN1Q9BRT3 115 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 CELA2AP08217 269 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 TCL1AP56279 114 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 R3HDM4Q96D70 268 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 PLPPR2Q96GM1 343 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 OR2D2Q9H210 308 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 TMEM106BQ9NUM4 274 aa11.13□□□□□ -0.63
TRIM35-201ENST00000305364 UBE2NP61088 152 aaKnown RBP11.12□□□□□ -0.63
TRIM35-201ENST00000305364 SLC35B1P78383 322 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 WIPI1Q5MNZ9 446 aaPredicted RBP11.12□□□□□ -0.63
TRIM35-201ENST00000305364 PRAMEF5Q5TYX0 476 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 PRAMEF6Q5VXH4 476 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 VASH2Q86V25 355 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 KMT5CQ86Y97 462 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 HIPK2Q9H2X6 1198 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
TRIM35-201ENST00000305364 IGHEP01854 428 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 RAC3P60763 192 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 MRPL18Q9H0U6 180 aaKnown RBP11.12□□□□□ -0.63
TRIM35-201ENST00000305364 PCED1AQ9H1Q7 454 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 C1QTNF9P0C862 333 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 CA6P23280 308 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 APOBEC3DQ96AK3 386 aaPredicted RBP11.12□□□□□ -0.63
TRIM35-201ENST00000305364 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
TRIM35-201ENST00000305364 BOKQ9UMX3 212 aaPredicted RBP11.12□□□□□ -0.63
TRIM35-201ENST00000305364 SYNGR3O43761 229 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 VENTXO95231 258 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 GNG3P63215 75 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ARL16Q0P5N6 197 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 GCNT2Q8N0V5 402 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 TMEM54Q969K7 222 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
TRIM35-201ENST00000305364 WIPI2Q9Y4P8 454 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 TIGITQ495A1 244 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 TCTEX1D1Q8N7M0 179 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ZFHX2Q9C0A1 2572 aaPredicted RBP11.11□□□□□ -0.63
TRIM35-201ENST00000305364 hCG_38984A0A1B0GV85 526 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 HSBP1O75506 76 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 PAX9P55771 341 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 KIAA1644Q3SXP7 199 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 CADM4Q8NFZ8 388 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 SFRP2Q96HF1 295 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 TCFL5Q9UL49 500 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ACTL6BO94805 426 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 ATP5G3P48201 142 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 BET1LQ9NYM9 111 aa11.11□□□□□ -0.63
TRIM35-201ENST00000305364 NUP210LQ5VU65 1888 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 SERF1AO75920 110 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 NAPSAO96009 420 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 ADMP35318 185 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 ACSM6Q6P461 480 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 Q6ZRM9 215 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 ABHD3Q8WU67 409 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 LSM10Q969L4 123 aaKnown RBP11.1□□□□□ -0.63
TRIM35-201ENST00000305364 APH1AQ96BI3 265 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 GALMQ96C23 342 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 CLCF1Q9UBD9 225 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 IGHV1OR15-9A0A0B4J2B8 117 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 ZG16O60844 167 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 OR5G3P0C626 314 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 TFF3Q07654 80 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 OR4B1Q8NGF8 309 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 RFESDQ8TAC1 157 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 SSMEM1Q8WWF3 244 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 NABP1Q96AH0 204 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 WNT5BQ9H1J7 359 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 OBP2BQ9NPH6 170 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 SH2D1BO14796 132 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-201ENST00000305364 DCAF10Q5QP82 559 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-201ENST00000305364 SSC4DQ8WTU2 575 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 IL36GQ9NZH8 169 aa11.1□□□□□ -0.63
TRIM35-201ENST00000305364 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms