RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 PARP12Q9H0J9 701 aaKnown RBP13□□□□□ -0.33
SRGAP2C-201ENST00000304465 LINC00574Q9H8X3 128 aa13□□□□□ -0.33
SRGAP2C-201ENST00000304465 KCNIP1Q9NZI2 227 aa13□□□□□ -0.33
SRGAP2C-201ENST00000304465 IGKV1D-13A0A0B4J2D9 117 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 H3BUX3 64 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 PPYP01298 95 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 ZNF728P0DKX0 622 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 IGKV1-13P0DP09 117 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 GZMHP20718 246 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 GLP1RP43220 463 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 UCP3P55916 312 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 SURF2Q15527 256 aaPredicted RBP12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 PRR18Q8N4B5 295 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 IL1F10Q8WWZ1 152 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 SSX3Q99909 188 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR6C3Q9NZP0 311 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 SLC23A1Q9UHI7 598 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 RNF114Q9Y508 228 aa12.99□□□□□ -0.33
SRGAP2C-201ENST00000304465 C17orf98A8MV24 154 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 F2RL2O00254 374 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 PRAF2O60831 178 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 RBP4P02753 201 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 PI3P19957 117 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 DHODHQ02127 395 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 GNMTQ14749 295 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 C11orf42Q8N5U0 333 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR52L2PQ8NGH6 319 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 RFESDQ8TAC1 157 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 WFDC12Q8WWY7 111 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 ARL11Q969Q4 196 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 NBEAL1Q6ZS30 2694 aa12.98□□□□□ -0.33
SRGAP2C-201ENST00000304465 KBTBD11-OT1A0A1B0GTJ5 212 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 ZBTB25P24278 435 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 LOXL3P58215 753 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 HTD2P86397 168 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 LRRC75BQ2VPJ9 315 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 UTF1Q5T230 341 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 TMED4Q7Z7H5 227 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 ZNF565Q8N9K5 539 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR52B4Q8NGK2 314 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 LINC01006Q8NI28 216 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 C17orf50Q8WW18 174 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 GALMQ96C23 342 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 NEURL2Q9BR09 285 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 MEGF9Q9H1U4 602 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 CALYQ9NYX4 217 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR2W1Q9Y3N9 320 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 ARG1P05089 322 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 CTSDP07339 412 aaPredicted RBP12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR4E1P0C645 316 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 IGHV1-8P0DP01 117 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 ECI1P42126 302 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 DLX6P56179 175 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 FXYD4P59646 89 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 AANATQ16613 207 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 RSRP1Q9BUV0 290 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 OR51J1Q9H342 316 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 RAB18Q9NP72 206 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
SRGAP2C-201ENST00000304465 TRGV10A0A0A0MS01 117 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 MMP23AO75900 390 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 IGLV2-14P01704 120 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 GNRHRP30968 328 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 CEACAM6P40199 344 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 PPP1R1AQ13522 171 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 LY6EQ16553 131 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 ZNF626Q68DY1 528 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 Q6ZSV7 163 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 TOMM40LQ969M1 308 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 SCGB3A2Q96PL1 93 aa12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 UBE2J1Q9Y385 318 aaPredicted RBP12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 TBL2Q9Y4P3 447 aaKnown RBP12.96□□□□□ -0.34
SRGAP2C-201ENST00000304465 FAM172BPA6NC97 362 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 HMX3A6NHT5 357 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 SPINT2O43291 252 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 PGAM2P15259 253 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 PPP1CCP36873 323 aaKnown RBP12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 HERV-K104P61576 105 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 CD300CQ08708 224 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 DHRS2Q13268 280 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 GAL3ST2Q9H3Q3 398 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 TAS2R3Q9NYW6 316 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 SESN1Q9Y6P5 492 aa12.95□□□□□ -0.34
SRGAP2C-201ENST00000304465 IGHV3-43A0A0B4J1X8 118 aa12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 TSPAN9O75954 239 aa12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 TRAPPC2P0DI81 140 aa12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 TRAPPC2BP0DI82 140 aa12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 IGHV3-43DP0DP04 118 aa12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 UBE2MP61081 183 aaKnown RBP12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 RRAS2P62070 204 aaPredicted RBP12.94□□□□□ -0.34
SRGAP2C-201ENST00000304465 CBX3Q13185 183 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms