RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CITED2Q99967 270 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-201ENST00000302528 RARRES2Q99969 163 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TMEM160Q9NX00 188 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TNFRSF18Q9Y5U5 241 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 GHRHP01286 108 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TRGC2P03986 189 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 RND2P52198 227 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 OR1P1Q8NH06 330 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF107Q9UII5 783 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-201ENST00000302528 PRRC2BQ5JSZ5 2229 aaKnown RBP9.02□□□□□ -0.97
CLIP1-201ENST00000302528 SLC25A20O43772 301 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 RCC1P18754 421 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-201ENST00000302528 RPL8P62917 257 aaKnown RBP9.02□□□□□ -0.97
CLIP1-201ENST00000302528 FXYD3Q14802 87 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 LY6EQ16553 131 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 FBXW9Q5XUX1 488 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TPRX1Q8N7U7 411 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 A0A1B0GWB2 263 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 ERGP11308 486 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 CENPVQ7Z7K6 275 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-201ENST00000302528 TXNDC17Q9BRA2 123 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 C2orf88Q9BSF0 95 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 RBKSQ9H477 322 aa9.02□□□□□ -0.97
CLIP1-201ENST00000302528 A1L4Q6 167 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 TMEM250H0YL14 139 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 CXCL3P19876 107 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 ZFP36L2P47974 494 aaKnown RBP9.01□□□□□ -0.97
CLIP1-201ENST00000302528 CD300LDQ6UXZ3 194 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 MYEOVQ96EZ4 313 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 NRIP2Q9BQI9 281 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 SMDT1Q9H4I9 107 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 CDC42EP2O14613 210 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 MGST3O14880 152 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 SRIP30626 198 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
CLIP1-201ENST00000302528 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF488Q96MN9 340 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 CT62P0C5K7 136 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF250P15622 560 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 CNTFRP26992 372 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 PCP4P48539 62 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 XAF1Q6GPH4 301 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 C21orf140B9A014 251 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 H7C1H1 209 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 OGG1O15527 345 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 GCSAMQ8N6F7 178 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 PIMREGQ9BSJ6 248 aa9.01□□□□□ -0.97
CLIP1-201ENST00000302528 H3BRM9 83 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 F12P00748 615 aaPredicted RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 TDGF1P13385 188 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 MMP16P51512 607 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 CHST5Q9GZS9 411 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 MBD1Q9UIS9 605 aaPredicted RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 TRAV21A0A0B4J279 112 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 A0A1W2PQD3 144 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 IGLV3-25P01717 112 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 KIR3DL3Q8N743 410 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 KIF13BQ9NQT8 1826 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 KCNE1BA0A087WTH5 132 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 NPPCP23582 126 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 C1orf185Q5T7R7 199 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 C1QL3Q5VWW1 255 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 PCSK4Q6UW60 755 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 ATOH7Q8N100 152 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 ZNF98A6NK75 572 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 ISG15P05161 165 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 VSIG8P0DPA2 414 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 HTN3P15516 51 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 RBM11P57052 281 aaKnown RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 MEF2BQ02080 365 aaPredicted RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 C9orf62Q8N4C0 152 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 TTC9CQ8N5M4 171 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 PEF1Q9UBV8 284 aaKnown RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 TUBD1Q9UJT1 453 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 LDLRAD4O15165 306 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 MIC13Q5XKP0 118 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 BIVMQ86UB2 503 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 HOGA1Q86XE5 327 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 C10orf111Q8N326 155 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 OR5AN1Q8NGI8 311 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 UCN2Q96RP3 112 aa9□□□□□ -0.97
CLIP1-201ENST00000302528 PSMG3Q9BT73 122 aaPredicted RBP9□□□□□ -0.97
CLIP1-201ENST00000302528 HOXA5P20719 270 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 CTGFP29279 349 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 RHOVQ96L33 236 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 ATXN7O15265 892 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-201ENST00000302528 TGFAP01135 160 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 ASAH2BP0C7U1 165 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 LINC01555Q8NAE3 123 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 SERGEFQ9UGK8 458 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 CROCCQ5TZA2 2017 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 LINC00862A6NCI5 91 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 UNQ9370/PRO34162Q6UXP9 181 aa8.99□□□□□ -0.97
CLIP1-201ENST00000302528 ATG4DQ86TL0 474 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms