RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PRDM6Q9NQX0 595 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 PPP1R3CQ9UQK1 317 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 TRBV20OR9-2A0A075B6H5 130 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 G3V3Y1 287 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 S100GP29377 79 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 LHX2P50458 406 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 RAB7AP51149 207 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 GPM6AP51674 278 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 RPS16P62249 146 aaKnown RBP9.2□□□□□ -0.94
ZNF558-201ENST00000301475 IL1F10Q8WWZ1 152 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 OR2H1Q9GZK4 316 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 PATZ1Q9HBE1 687 aaKnown RBP9.2□□□□□ -0.94
ZNF558-201ENST00000301475 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 ZNF391Q9UJN7 358 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 ZFP30Q9Y2G7 519 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 GTF3C1Q12789 2109 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 A0A1W2PR77 199 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 DUX1O43812 170 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 CD99P14209 185 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
ZNF558-201ENST00000301475 CBLN1P23435 193 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 FOXL1Q12952 345 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 HLA-BQ31612 363 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 ARL6IP6Q8N6S5 226 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 TSTD1Q8NFU3 115 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 STRADBQ9C0K7 418 aa9.2□□□□□ -0.94
ZNF558-201ENST00000301475 TRAV39A0A0B4J263 110 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 TMPRSS2O15393 492 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 TRAPPC6AO75865 159 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 SRFP11831 508 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 FKBP2P26885 142 aaKnown RBP9.19□□□□□ -0.94
ZNF558-201ENST00000301475 TPPP2P59282 170 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 UBE2G2P60604 165 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 YPEL3P61236 119 aaPredicted RBP9.19□□□□□ -0.94
ZNF558-201ENST00000301475 SELENOTP62341 195 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 TMPRSS7Q7RTY8 843 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 OR1L1Q8NH94 360 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 UBALD1Q8TB05 177 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 RDH5Q92781 318 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 ZNF488Q96MN9 340 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 ZDHHC11Q9H8X9 412 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 SYNGR1O43759 233 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 NDUFB4O95168 129 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 CELA2AP08217 269 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 EPHA8P29322 1005 aaPredicted RBP9.19□□□□□ -0.94
ZNF558-201ENST00000301475 CHRNB4P30926 498 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 COL5A1-AS1Q5SY13 56 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 SGCZQ96LD1 299 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 FOXJ2Q9P0K8 574 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 GPR179Q6PRD1 2367 aa9.19□□□□□ -0.94
ZNF558-201ENST00000301475 ZIC3O60481 467 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 SLC23A3Q6PIS1 610 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 RNASE8Q8TDE3 154 aaKnown RBP9.18□□□□□ -0.94
ZNF558-201ENST00000301475 SPSB4Q96A44 273 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 SFRP2Q96HF1 295 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 TECTBQ96PL2 329 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 NPCDR1Q9BY65 106 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 PCED1AQ9H1Q7 454 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
ZNF558-201ENST00000301475 PMS2P5A8MQ11 134 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 NDUFB8O95169 186 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 ESDP10768 282 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
ZNF558-201ENST00000301475 PAFAH1B2P68402 229 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 MMDQ15546 238 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 GCSAMLQ5JQS6 135 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 WDR74Q6RFH5 385 aaPredicted RBP9.18□□□□□ -0.94
ZNF558-201ENST00000301475 Q8N976 141 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 OR6C1Q96RD1 312 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 CDX2Q99626 313 aaPredicted RBP9.18□□□□□ -0.94
ZNF558-201ENST00000301475 FOXB1Q99853 325 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 DEFB126Q9BYW3 111 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 PRO3102Q9H379 93 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 CLN8Q9UBY8 286 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 FBXL7Q9UJT9 491 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 MED12LQ86YW9 2145 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 TRAV24A0A0B4J272 114 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 WDR1O75083 606 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 FRMD6-AS1P0C7T7 363 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 CCL3P10147 92 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 COX5AP20674 150 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 HNF1AP20823 631 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 RBX1P62877 108 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 CEACAM16Q2WEN9 425 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 STPG4Q8N801 248 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 CPEB3Q8NE35 698 aaKnown RBP9.18□□□□□ -0.94
ZNF558-201ENST00000301475 SLC35E1Q96K37 410 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 TMEM147Q9BVK8 224 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 KCNS2Q9ULS6 477 aa9.18□□□□□ -0.94
ZNF558-201ENST00000301475 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
ZNF558-201ENST00000301475 MSMO1Q15800 293 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 OR5AU1Q8NGC0 362 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 C1QTNF5Q9BXJ0 243 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 PROK2Q9HC23 129 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 MSL2Q9HCI7 577 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 CRISP2P16562 243 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 CDC34P49427 236 aaPredicted RBP9.17□□□□□ -0.94
ZNF558-201ENST00000301475 THBS3P49746 956 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 FGFRL1Q8N441 504 aa9.17□□□□□ -0.94
ZNF558-201ENST00000301475 CPT1CQ8TCG5 803 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms