RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PMCHL1Q16048 86 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 SP5Q6BEB4 398 aaPredicted RBP12.28□□□□□ -0.44
CDT1-201ENST00000301019 GCNT2Q8N0V5 402 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 SARAFQ96BY9 339 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 NEIL1Q96FI4 390 aaPredicted RBP12.28□□□□□ -0.44
CDT1-201ENST00000301019 CBR3O75828 277 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 CD46P15529 392 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 MALLQ13021 153 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 OR4B1Q8NGF8 309 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 ABHD3Q8WU67 409 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 DDIT4LQ96D03 193 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 SLC45A2Q9UMX9 530 aa12.27□□□□□ -0.44
CDT1-201ENST00000301019 DOCK10Q96BY6 2186 aa12.27□□□□□ -0.45
CDT1-201ENST00000301019 TRBV20OR9-2A0A075B6H5 130 aa12.27□□□□□ -0.45
CDT1-201ENST00000301019 NPIPB7O75200 414 aa12.27□□□□□ -0.45
CDT1-201ENST00000301019 RDH5Q92781 318 aa12.27□□□□□ -0.45
CDT1-201ENST00000301019 TAF15Q92804 592 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDT1-201ENST00000301019 ANAPC16Q96DE5 110 aa12.27□□□□□ -0.45
CDT1-201ENST00000301019 PCDH15Q96QU1 1955 aa12.27□□□□□ -0.45
CDT1-201ENST00000301019 SYNGR2O43760 224 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 HTD2P86397 168 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 HHEXQ03014 270 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 PLPPR5Q32ZL2 321 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 NMSQ5H8A3 153 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 FAM69BQ5VUD6 431 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 SMRP1Q8NCR6 262 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 P2RX4Q99571 388 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
CDT1-201ENST00000301019 GP6Q9HCN6 339 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 ZNF207O43670 478 aaKnown RBP12.26□□□□□ -0.45
CDT1-201ENST00000301019 DHRS3O75911 302 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 EFNA3P52797 238 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 GFERP55789 205 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 OR2Y1Q8NGV0 311 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 WDR61Q9GZS3 305 aaKnown RBP12.26□□□□□ -0.45
CDT1-201ENST00000301019 SLC35D1Q9NTN3 355 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 CLCF1Q9UBD9 225 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 ABCA1O95477 2261 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 SLC22A20A6NK97 555 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 TNFSF14O43557 240 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 NUDT3O95989 172 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 ADH1BP00325 375 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 CA1P00915 261 aaPredicted RBP12.26□□□□□ -0.45
CDT1-201ENST00000301019 DEPPQ9NTK1 212 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 SERTAD4Q9NUC0 356 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 KLRF1Q9NZS2 232 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 ARL2-SNX15V9GYD0 113 aa12.26□□□□□ -0.45
CDT1-201ENST00000301019 IGHV2-70DA0A0C4DH43 119 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 SCO2A0A1W2PP80 73 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 G3V3Y1 287 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 K7EP13 123 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 M0R135 149 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 IGHG1P01857 330 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 SRIP30626 198 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 SRP14P37108 136 aaKnown RBP12.25□□□□□ -0.45
CDT1-201ENST00000301019 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 OSR2Q8N2R0 312 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 ZNF439Q8NDP4 499 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 MBD3L1Q8WWY6 194 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 WFDC12Q8WWY7 111 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 ZNF799Q96GE5 643 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
CDT1-201ENST00000301019 EFNA2O43921 213 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 TUSC2O75896 110 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 KRASP01116 189 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 MRPL49Q13405 166 aaKnown RBP12.25□□□□□ -0.45
CDT1-201ENST00000301019 RIPPLY2Q5TAB7 128 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 OCC1Q8TAD7 63 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 ZNF488Q96MN9 340 aa12.25□□□□□ -0.45
CDT1-201ENST00000301019 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
CDT1-201ENST00000301019 GPX1P07203 203 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 UQCRFS1P47985 274 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 DEFB119Q8N690 84 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 OR1L1Q8NH94 360 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 KLHDC7BQ96G42 594 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 FSCN3Q9NQT6 498 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 MUC21A0A0G2JKD1 596 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 FAM53AQ6NSI3 398 aaPredicted RBP12.24□□□□□ -0.45
CDT1-201ENST00000301019 Q8N976 141 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 MRGPRDQ8TDS7 321 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 ZNF721Q8TF20 911 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 BORCS7Q96B45 105 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 PNRC2Q9NPJ4 139 aaKnown RBP12.24□□□□□ -0.45
CDT1-201ENST00000301019 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
CDT1-201ENST00000301019 ZNF83P51522 516 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 LINC00205P59089 165 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 PAFAH1B2P68402 229 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 PRAMEF20Q5VT98 475 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
CDT1-201ENST00000301019 APOBEC3DQ96AK3 386 aaPredicted RBP12.24□□□□□ -0.45
CDT1-201ENST00000301019 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms