RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 F6UZH7 168 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 VEGFBP49765 207 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 LINC00310P59036 64 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
TVP23A-201ENST00000299866 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 ZNF90Q03938 601 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 FGFRL1Q8N441 504 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 SFRP2Q96HF1 295 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 BTF3L4Q96K17 158 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 OR6C1Q96RD1 312 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 TRAV38-1A0A0B4J264 116 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 AQP7O14520 342 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 CCL3P10147 92 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
TVP23A-201ENST00000299866 CDC34P49427 236 aaPredicted RBP11.02□□□□□ -0.65
TVP23A-201ENST00000299866 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
TVP23A-201ENST00000299866 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.65
TVP23A-201ENST00000299866 ZIC3O60481 467 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 IGFBP7Q16270 282 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 ARL6IP6Q8N6S5 226 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 MRPL18Q9H0U6 180 aaKnown RBP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 UBE2ZQ9H832 354 aaPredicted RBP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 AKIRIN1Q9H9L7 192 aaPredicted RBP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A10PA6NDY2 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A18PA6NE21 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A16PA6NEW6 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A20PA6NIJ5 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A8PA6NJQ4 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A7PA6NKC0 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A22PA8MWA6 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A12PA8MX19 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A5PA8MXJ8 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A23PA8MXZ1 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 C10orf142B7Z368 130 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 RBMXL2O75526 392 aaKnown RBP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 CBR3O75828 277 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 SERPINA7P05543 415 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A15PP0C7V4 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A13PP0C7W8 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A14PP0C7W9 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FAM90A24PP0C7X0 464 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 ZXDAP98168 799 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 FOXL1Q12952 345 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 Q6ZVH6 145 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 MRPL52Q86TS9 123 aaKnown RBP11.01□□□□□ -0.65
TVP23A-201ENST00000299866 OR10P1Q8NGE3 313 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 ZNF391Q9UJN7 358 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 RNF114Q9Y508 228 aa11.01□□□□□ -0.65
TVP23A-201ENST00000299866 C20orf202A1L168 122 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 EPOPA6NHQ4 379 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 SLC17A3O00476 420 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 IGLV2-14P01704 120 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 PTTG1IPP53801 180 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 RPP30P78346 268 aaKnown RBP11□□□□□ -0.65
TVP23A-201ENST00000299866 HYAL1Q12794 435 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 FBXW9Q5XUX1 488 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 MCEMP1Q8IX19 187 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 STPG4Q8N801 248 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 CPEB3Q8NE35 698 aaKnown RBP11□□□□□ -0.65
TVP23A-201ENST00000299866 SCRG1O75711 98 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 G6PCP35575 357 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 LHX2P50458 406 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 CARD18P57730 90 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 ZNF816Q0VGE8 651 aaPredicted RBP11□□□□□ -0.65
TVP23A-201ENST00000299866 YRDCQ86U90 279 aaKnown RBP11□□□□□ -0.65
TVP23A-201ENST00000299866 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 NPCDR1Q9BY65 106 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 PARD6GQ9BYG4 376 aaPredicted RBP11□□□□□ -0.65
TVP23A-201ENST00000299866 A0A1W2PR77 199 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 SIRPB1O00241 398 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 SIGLECL1Q8N7X8 197 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 OR5A2Q8NGI9 324 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 TECTBQ96PL2 329 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 TXN2Q99757 166 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 FBXL7Q9UJT9 491 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
TVP23A-201ENST00000299866 WDFY3Q8IZQ1 3526 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 IGLV3-12A0A075B6K2 115 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 DIRC3C9JPN6 131 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 FCN1O00602 326 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 SPINK4O60575 86 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 ZG16O60844 167 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 IER3P46695 156 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 EDDM3BP56851 147 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 MRPL21Q7Z2W9 205 aaKnown RBP10.99□□□□□ -0.65
TVP23A-201ENST00000299866 OR10G8Q8NGN5 311 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 CPT1CQ8TCG5 803 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 LIN7CQ9NUP9 197 aaKnown RBP10.99□□□□□ -0.65
TVP23A-201ENST00000299866 BRWD1Q9NSI6 2320 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 TRAV24A0A0B4J272 114 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 PIGBOS1A0A0B4J2F0 54 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 SH2D1BO14796 132 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 CXCL13O43927 109 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 OR5G3P0C626 314 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 SPATA45Q537H7 98 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms