RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 MAP1LC3B2A6NCE7 125 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 RPL30P62888 115 aaKnown RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 ARL16Q0P5N6 197 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 HABP2Q14520 560 aaPredicted RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 SPINK9Q5DT21 86 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 CLDND2Q8NHS1 167 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 DTD1Q8TEA8 209 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 COQ2Q96H96 371 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 PARD6AQ9NPB6 346 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 ARHGAP21Q5T5U3 1957 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 MUC3AQ02505 3323 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 ZNF727A8MUV8 499 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 C17orf98A8MV24 154 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 IFNL4K9M1U5 179 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 KITLGP21583 273 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 LMO1P25800 156 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 PAX6P26367 422 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 ZNF674Q2M3X9 581 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 RBMS3Q6XE24 437 aaKnown RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 SSX9Q7RTT3 188 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 TAF15Q92804 592 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDH8-201ENST00000299345 PSMG3Q9BT73 122 aaPredicted RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 DCTN5Q9BTE1 182 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 CACNA1GO43497 2377 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 IGHV1-18A0A0C4DH31 117 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 SPRY3O43610 288 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 ACAA1P09110 424 aaPredicted RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 WDR61Q9GZS3 305 aaKnown RBP11.42□□□□□ -0.58
CDH8-201ENST00000299345 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
CDH8-201ENST00000299345 GTF3C1Q12789 2109 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 COL27A1Q8IZC6 1860 aaPredicted RBP11.41□□□□□ -0.58
CDH8-201ENST00000299345 ODAMA1E959 279 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 LRRC30A6NM36 301 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 IGHV3-13P01766 116 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 IGHV3-7P01780 117 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 WNT2P09544 360 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 FOLR2P14207 255 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 ERVK-16P61578 105 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 TRAT1Q6PIZ9 186 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 Q6ZR03 302 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 HSD17B10Q99714 261 aaKnown RBP11.41□□□□□ -0.58
CDH8-201ENST00000299345 HES4Q9HCC6 221 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
CDH8-201ENST00000299345 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDH8-201ENST00000299345 ADH4P08319 380 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 BCL2P10415 239 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 GZMHP20718 246 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 FGF7P21781 194 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 C11orf53Q8IXP5 236 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 RCC1LQ96I51 464 aaKnown RBP11.41□□□□□ -0.58
CDH8-201ENST00000299345 LURAP1Q96LR2 239 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 VSIRQ9H7M9 311 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
CDH8-201ENST00000299345 COA4Q9NYJ1 87 aa11.41□□□□□ -0.58
CDH8-201ENST00000299345 SMCO3A2RU48 225 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 FCGR3BO75015 233 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 RPS23P62266 143 aaKnown RBP11.4□□□□□ -0.58
CDH8-201ENST00000299345 PRAMEF5Q5TYX0 476 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 C1orf174Q8IYL3 243 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 STARD4Q96DR4 205 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 TMEM147Q9BVK8 224 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 USF3Q68DE3 2245 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 M0R1X1 148 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 FABP9Q0Z7S8 132 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 ATP6V1FQ16864 119 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 PRR7Q8TB68 274 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 IGHV3OR15-7A0A075B7D8 119 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 ZG16O60844 167 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 CLDN14O95500 239 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 KLF3P57682 345 aaPredicted RBP11.4□□□□□ -0.58
CDH8-201ENST00000299345 ZNF66Q6ZN08 573 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 MOGAT3Q86VF5 341 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 OR4A16Q8NH70 328 aa11.4□□□□□ -0.58
CDH8-201ENST00000299345 INTS1Q8N201 2190 aaKnown RBP11.39□□□□□ -0.59
CDH8-201ENST00000299345 IFNA10P01566 189 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 NQO2P16083 231 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 MEOX2P50222 304 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 HSPB7Q9UBY9 170 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 EIF2S3P41091 472 aaKnown RBP11.39□□□□□ -0.59
CDH8-201ENST00000299345 KIAA0141Q14154 515 aaPredicted RBP11.39□□□□□ -0.59
CDH8-201ENST00000299345 IGFL2Q6UWQ7 119 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 SLC25A22Q9H936 323 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 HEYLQ9NQ87 328 aaPredicted RBP11.39□□□□□ -0.59
CDH8-201ENST00000299345 SPTBN2O15020 2390 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 TRAV1-1A0A0B4J248 108 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 RAB29O14966 203 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 MRGPRGQ86SM5 289 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 ZNF295-AS1Q8N0V1 137 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 OR2V2Q96R30 315 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
CDH8-201ENST00000299345 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms