RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 REG1BP48304 166 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 GFRA1P56159 465 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 DLX6P56179 175 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR4D9Q8NGE8 314 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 HARBI1Q96MB7 349 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 PIKFYVEQ9Y2I7 2098 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR11H12B2RN74 326 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 J3QR06 171 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 EDIL3O43854 480 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ADRA2AP08913 450 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 TRGC1P0CF51 173 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 MDKP21741 143 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ACER2Q5QJU3 275 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR11H1Q8NG94 326 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR11H2Q8NH07 326 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 NEU1Q99519 415 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF430Q9H8G1 570 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 RNF122Q9H9V4 155 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 PXMP4Q9Y6I8 212 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 FFAR1O14842 300 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 C16orf47Q6ZP98 133 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 DEFB124Q8NES8 71 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR6X1Q8NH79 312 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF71Q9NQZ8 489 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 COL5A3P25940 1745 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 KLF9Q13886 244 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ZFP64Q9NPA5 681 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM8BA6NDV4 472 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 PRSS23O95084 383 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 MUC1P15941 1255 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 LOXL3P58215 753 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 VSTM2LQ96N03 204 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 SFXN3Q9BWM7 321 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 MRPL16Q9NX20 251 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 C1RLQ9NZP8 487 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 A8MXK9 166 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 CD3EP07766 207 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SLC25A2Q9BXI2 301 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 OR2H1Q9GZK4 316 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 MPC1Q9Y5U8 109 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 KBTBD11O94819 623 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 CELA2BP08218 269 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SRD5A2P31213 254 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SYT8Q8NBV8 401 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 LIPT2A6NK58 231 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 A8MWL6 223 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SIPA1L3O60292 1781 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SLC25A40Q8TBP6 338 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 CT55Q8WUE5 264 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 ALG14Q96F25 216 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 HDHD3Q9BSH5 251 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 A1L4Q6 167 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 EML2O95834 649 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 NFAM1Q8NET5 270 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 LPAR2Q9HBW0 351 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SLC25A10Q9UBX3 287 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 IGHV3OR16-12A0A075B7B8 117 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 EFNB2P52799 333 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 MFAP2P55001 183 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 SELENOTP62341 195 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 ATOH7Q8N100 152 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 OR4C13Q8NGP0 309 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM45BQ96B21 275 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 MRGPRX3Q96LB0 322 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 BRWD3Q6RI45 1802 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 IGKV3D-11A0A0A0MRZ8 115 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 GCM2O75603 506 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 IGKV3-11P04433 115 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 RRN3P1Q2M238 152 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 CBLN3Q6UW01 205 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 PLPPR1Q8TBJ4 325 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 BEX4Q9NWD9 120 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 ODAMA1E959 279 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 LINC00869P0C866 280 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 OTX1P32242 354 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 WDR25Q64LD2 544 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 LSM10Q969L4 123 aaKnown RBP4.84□□□□□ -1.63
CPSF2-201ENST00000298875 PGLYRP4Q96LB8 373 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 ADAMTS7Q9UKP4 1686 aa4.84□□□□□ -1.63
CPSF2-201ENST00000298875 RPL36A-HNRNPH2H7BZ11 118 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 LSM6P62312 80 aaKnown RBP4.84□□□□□ -1.64
CPSF2-201ENST00000298875 C1QL4Q86Z23 238 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 TINAGQ9UJW2 476 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 TRBV23-1A0A0A0MS06 115 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 GLIPR1P48060 266 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 GCSAMLQ5JQS6 135 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 LHFPL4Q7Z7J7 247 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 ZNF418Q8TF45 676 aaPredicted RBP4.84□□□□□ -1.64
CPSF2-201ENST00000298875 IMMP2LQ96T52 175 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 ST20Q9HBF5 79 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 F5P12259 2224 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 KLK2P20151 261 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 CYSLTR1Q9Y271 337 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 SCN1AP35498 2009 aa4.84□□□□□ -1.64
CPSF2-201ENST00000298875 RBFOX2O43251 390 aaKnown RBP eCLIP4.83□□□□□ -1.64
CPSF2-201ENST00000298875 TFPI2P48307 235 aa4.83□□□□□ -1.64
CPSF2-201ENST00000298875 IBA57Q5T440 356 aaKnown RBP4.83□□□□□ -1.64
CPSF2-201ENST00000298875 PRR7Q8TB68 274 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms