RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 ASPHD1Q5U4P2 390 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 APH1AQ96BI3 265 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 ABHD14BQ96IU4 210 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
SKA3-201ENST00000298260 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 LOC102725191A0A1B0GVB3 256 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 DRD1P21728 446 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 NTF4P34130 210 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 IER3P46695 156 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 HBG1P69891 147 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 HBG2P69892 147 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 FAM53AQ6NSI3 398 aaPredicted RBP11.42□□□□□ -0.58
SKA3-201ENST00000298260 MCEMP1Q8IX19 187 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 FAM19A2Q8N3H0 131 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 Q8N976 141 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 ADPRHL1Q8NDY3 354 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 ULBP2Q9BZM5 246 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 MRPL18Q9H0U6 180 aaKnown RBP11.42□□□□□ -0.58
SKA3-201ENST00000298260 LAMTOR2Q9Y2Q5 125 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 FREM1Q5H8C1 2179 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 KIAA1549Q9HCM3 1950 aa11.42□□□□□ -0.58
SKA3-201ENST00000298260 TLX3O43711 291 aaPredicted RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 HYPMO75409 117 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 CCL2P13500 99 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 PTGDSP41222 190 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 OR1D5P58170 312 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 UBE2NP61088 152 aaKnown RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 LCN2P80188 198 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 PCSK4Q6UW60 755 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 LHFPL2Q6ZUX7 228 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 WIPI2Q9Y4P8 454 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 SELENOKQ9Y6D0 94 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 YLPM1P49750 1951 aaKnown RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 AQP7P3A6NL99 342 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 MLNRO43193 412 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 GDF9O60383 454 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 WDR1O75083 606 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 CCNOP22674 350 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 SLC23A3Q6PIS1 610 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 SFRP2Q96HF1 295 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 TECTBQ96PL2 329 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 ZNF552Q9H707 407 aaPredicted RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 TBL2Q9Y4P3 447 aaKnown RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 CTXND1A0A1B0GTU2 59 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 TUSC2O75896 110 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 ZNF32P17041 273 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 GPM6AP51674 278 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 ZNF90Q03938 601 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 STARD4Q96DR4 205 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 LRFN3Q9BTN0 628 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 PCED1AQ9H1Q7 454 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 KCNS2Q9ULS6 477 aa11.41□□□□□ -0.58
SKA3-201ENST00000298260 RBM7Q9Y580 266 aaKnown RBP11.41□□□□□ -0.58
SKA3-201ENST00000298260 LNP1A1A4G5 178 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 IGHV3-9P01782 118 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 SERPINA7P05543 415 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 GABRG2P18507 467 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 ZDHHC16Q969W1 377 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 FGF23Q9GZV9 251 aaPredicted RBP11.4□□□□□ -0.58
SKA3-201ENST00000298260 EXPH5Q8NEV8 1989 aa11.4□□□□□ -0.58
SKA3-201ENST00000298260 NPIPA2E9PIF3 369 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 NPIPA3F8WFD2 350 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 FCN1O00602 326 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 NXPH2O95156 264 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 CRYGSP22914 178 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 SUMO1P63165 101 aaKnown RBP11.4□□□□□ -0.59
SKA3-201ENST00000298260 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.4□□□□□ -0.59
SKA3-201ENST00000298260 RABEPKQ7Z6M1 372 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 PRO3102Q9H379 93 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 GAL3ST2Q9H3Q3 398 aa11.4□□□□□ -0.59
SKA3-201ENST00000298260 PRRC2CQ9Y520 2896 aaKnown RBP11.39□□□□□ -0.59
SKA3-201ENST00000298260 IGHV3-64DA0A0J9YX35 117 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 KITLGP21583 273 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 CTRLP40313 264 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 TNFRSF4P43489 277 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 SIGLECL1Q8N7X8 197 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 GNB4Q9HAV0 340 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 GPR179Q6PRD1 2367 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 SYNGR3O43761 229 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 CBR3O75828 277 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 KRASP01116 189 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 IGLC3P0DOY3 106 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 AMTP48728 403 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 CFHR1Q03591 330 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 OR8B8Q15620 311 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 OCC1Q8TAD7 63 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 CDX2Q99626 313 aaPredicted RBP11.39□□□□□ -0.59
SKA3-201ENST00000298260 OBP2AQ9NY56 170 aa11.39□□□□□ -0.59
SKA3-201ENST00000298260 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
SKA3-201ENST00000298260 IGLV2-14P01704 120 aa11.38□□□□□ -0.59
SKA3-201ENST00000298260 LINC00205P59089 165 aa11.38□□□□□ -0.59
SKA3-201ENST00000298260 PSG7Q13046 419 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms