RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 SPANXN5Q5MJ07 72 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 SLC25A24Q6NUK1 477 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF610Q8N9Z0 462 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 MSL2Q9HCI7 577 aa16.52■□□□□ 0.23
NFIL3-201ENST00000297689 CISD1Q9NZ45 108 aaKnown RBP16.52■□□□□ 0.23
NFIL3-201ENST00000297689 PMS2P5A8MQ11 134 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 C17orf98A8MV24 154 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 TIMM8AO60220 97 aaPredicted RBP16.51■□□□□ 0.23
NFIL3-201ENST00000297689 OR2C1O95371 312 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 GLIPR1P48060 266 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 FABP6P51161 128 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 FAM90A2PQ658T7 463 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 SLC35E3Q7Z769 313 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 C1orf174Q8IYL3 243 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 ZADH2Q8N4Q0 377 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 MRGPRDQ8TDS7 321 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 RCC1LQ96I51 464 aaKnown RBP16.51■□□□□ 0.23
NFIL3-201ENST00000297689 AGMATQ9BSE5 352 aa16.51■□□□□ 0.23
NFIL3-201ENST00000297689 INTS1Q8N201 2190 aaKnown RBP16.51■□□□□ 0.23
NFIL3-201ENST00000297689 ODAMA1E959 279 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 LRRC30A6NM36 301 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 C15orf65H3BRN8 121 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 EIF3GO75821 320 aaKnown RBP eCLIP16.5■□□□□ 0.23
NFIL3-201ENST00000297689 MEOX2P50222 304 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 COL10A1Q03692 680 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 IGFL3Q6UXB1 125 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 SEM1Q6ZVN7 128 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 OR13A1Q8NGR1 328 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 TAF15Q92804 592 aaKnown RBP eCLIP16.5■□□□□ 0.23
NFIL3-201ENST00000297689 MRPL37Q9BZE1 423 aaKnown RBP16.5■□□□□ 0.23
NFIL3-201ENST00000297689 G6PCP35575 357 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 DLK1P80370 383 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 CD177Q8N6Q3 437 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 SEBOXQ9HB31 216 aaPredicted RBP16.5■□□□□ 0.23
NFIL3-201ENST00000297689 UFSP2Q9NUQ7 469 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 FZR1Q9UM11 496 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 TIMM9Q9Y5J7 89 aa16.5■□□□□ 0.23
NFIL3-201ENST00000297689 CHD3Q12873 2000 aaKnown RBP16.5■□□□□ 0.23
NFIL3-201ENST00000297689 S1PR2O95136 353 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 CLDN14O95500 239 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 KRASP01116 189 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 BCL2P10415 239 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 GABRA2P47869 451 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 SLC38A11Q08AI6 406 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 CATR1Q13166 79 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 P2RY6Q15077 328 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 SMIM21Q3B7S5 101 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 LILRB2Q8N423 598 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 PINX1Q96BK5 328 aaKnown RBP16.49■□□□□ 0.23
NFIL3-201ENST00000297689 TVP23CQ96ET8 276 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF665Q9H7R5 613 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.49■□□□□ 0.23
NFIL3-201ENST00000297689 METTL1Q9UBP6 276 aaKnown RBP16.49■□□□□ 0.23
NFIL3-201ENST00000297689 SLC25A15Q9Y619 301 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 DIDO1Q9BTC0 2240 aaKnown RBP16.49■□□□□ 0.23
NFIL3-201ENST00000297689 SPTBN4Q9H254 2564 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 CEP295Q9C0D2 2601 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 OR5H1A6NKK0 313 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 K7EM74 188 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 RAB29O14966 203 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF737O75373 536 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 HTD2P86397 168 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 MSMPQ1L6U9 139 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 TMEM41BQ5BJD5 291 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF787Q6DD87 383 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 ADAM5Q6NVV9 412 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF66Q6ZN08 573 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF808Q8N4W9 903 aaPredicted RBP16.49■□□□□ 0.23
NFIL3-201ENST00000297689 CA5BP1Q8WTZ4 195 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 GNG13Q9P2W3 67 aa16.49■□□□□ 0.23
NFIL3-201ENST00000297689 SSTR5P35346 364 aa16.48■□□□□ 0.23
NFIL3-201ENST00000297689 CFHR2P36980 270 aa16.48■□□□□ 0.23
NFIL3-201ENST00000297689 TAGLN2P37802 199 aaKnown RBP16.48■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF816Q0VGE8 651 aaPredicted RBP16.48■□□□□ 0.23
NFIL3-201ENST00000297689 NIPSNAP3BQ9BS92 247 aa16.48■□□□□ 0.23
NFIL3-201ENST00000297689 OPN3Q9H1Y3 402 aaPredicted RBP16.48■□□□□ 0.23
NFIL3-201ENST00000297689 MBD3L4A6NDZ8 208 aaPredicted RBP16.47■□□□□ 0.23
NFIL3-201ENST00000297689 MBD3L3A6NE82 208 aaPredicted RBP16.47■□□□□ 0.23
NFIL3-201ENST00000297689 CXorf65A6NEN9 183 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 MBD3L5A6NJ08 208 aaPredicted RBP16.47■□□□□ 0.23
NFIL3-201ENST00000297689 LINC00473A8K010 186 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 ZNF727A8MUV8 499 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 KLK10O43240 276 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 GCH1P30793 250 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 CR1LQ2VPA4 569 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 TPRX1Q8N7U7 411 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 MBD3L2Q8NHZ7 208 aaPredicted RBP16.47■□□□□ 0.23
NFIL3-201ENST00000297689 NINJ1Q92982 152 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 SIRT7Q9NRC8 400 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 DSPP15924 2871 aaKnown RBP16.47■□□□□ 0.23
NFIL3-201ENST00000297689 PROP1O75360 226 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 CLDN1O95832 211 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 IGKV1D-33P01593 117 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 IGKV1-33P01594 117 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 ATP6V1FQ16864 119 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 OR2B11Q5JQS5 317 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 LCN15Q6UWW0 184 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 RPP25LQ8N5L8 163 aaKnown RBP16.47■□□□□ 0.23
NFIL3-201ENST00000297689 P2RX4Q99571 388 aa16.47■□□□□ 0.23
NFIL3-201ENST00000297689 PROCRQ9UNN8 238 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms