RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 C11orf1Q9H5F2 150 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 IFT22Q9H7X7 185 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 CACFD1Q9UGQ2 172 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 MMP24Q9Y5R2 645 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ZFYVE26Q68DK2 2539 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 RAB19A4D1S5 217 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 IQCF6A8MYZ5 107 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 H0Y980 276 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 SNRPCP09234 159 aaKnown RBP7.8□□□□□ -1.16
PRDM9-201ENST00000296682 P2RY6Q15077 328 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 C1orf185Q5T7R7 199 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 FAM24BQ8N5W8 94 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 FAM216BQ8N7L0 139 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 PLSCR2Q9NRY7 297 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 OOEPA6NGQ2 149 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 ZG16O60844 167 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 IGHG3P01860 377 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 APELAP0DMC3 54 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 KIAA0141Q14154 515 aaPredicted RBP7.8□□□□□ -1.16
PRDM9-201ENST00000296682 MSMO1Q15800 293 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 MSMPQ1L6U9 139 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 MST1LQ2TV78 715 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF497Q6ZNH5 498 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 UBAC2Q8NBM4 344 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 OR4A16Q8NH70 328 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 LRFN3Q9BTN0 628 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 SLC25A22Q9H936 323 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF727A8MUV8 499 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 NUDT19A8MXV4 375 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 C1QTNF9BB2RNN3 333 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 TNFSF4P23510 183 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 DVL1P1P54792 670 aaPredicted RBP7.8□□□□□ -1.16
PRDM9-201ENST00000296682 UQCC3Q6UW78 93 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 SEM1Q6ZVN7 128 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 CD177Q8N6Q3 437 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 OR4D5Q8NGN0 318 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 SAT2Q96F10 170 aaPredicted RBP7.8□□□□□ -1.16
PRDM9-201ENST00000296682 COQ2Q96H96 371 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 AIFM2Q9BRQ8 373 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 MRPL37Q9BZE1 423 aaKnown RBP7.8□□□□□ -1.16
PRDM9-201ENST00000296682 SLC39A9Q9NUM3 307 aa7.8□□□□□ -1.16
PRDM9-201ENST00000296682 A0A1W2PPE2 198 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 ERVK-16P61578 105 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 HBG1P69891 147 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 HBG2P69892 147 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 RBMXL3Q8N7X1 1067 aaKnown RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 OR5D13Q8NGL4 314 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 PLSCR4Q9NRQ2 329 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 AURKAIP1Q9NWT8 199 aaPredicted RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 ACACBO00763 2458 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 IGKV1-5P01602 117 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 UBE2G2P60604 165 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 UBE2KP61086 200 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 AWAT1Q58HT5 328 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 NCR3LG1Q68D85 454 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 FAM122CQ6P4D5 195 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 IL34Q6ZMJ4 242 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 OR4C12Q96R67 309 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 GP6Q9HCN6 339 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 LYRM2Q9NU23 88 aaPredicted RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 FAM215AQ9Y5M1 114 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 TRBV6-6A0A0A6YYG2 114 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 ODAMA1E959 279 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 RNF212BA8MTL3 300 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 DNASE2O00115 360 aaPredicted RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 ENSAO43768 121 aaKnown RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 IGKV3-15P01624 115 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 MDH2P40926 338 aaKnown RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 RPS10P46783 165 aaKnown RBP7.79□□□□□ -1.16
PRDM9-201ENST00000296682 KCNJ3P48549 501 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 SLC38A11Q08AI6 406 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 CLRN3Q8NCR9 226 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 LHX4Q969G2 390 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 TMEM56Q96MV1 263 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF665Q9H7R5 613 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 TMEM56-RWDD3S4R434 201 aa7.79□□□□□ -1.16
PRDM9-201ENST00000296682 hCG_1809904A0A1W2PP81 198 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 A0A1W2PR64 198 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 A0A1W2PRV1 198 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 LYNX1G3V0Z9 82 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 C16orf97H3BN30 126 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 IGKV1-39P01597 117 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 IGKV1D-39P04432 117 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 LYNX1P0DP58 116 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 TAGLN2P37802 199 aaKnown RBP7.78□□□□□ -1.16
PRDM9-201ENST00000296682 DLX1P56177 255 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 NECAP1Q8NC96 275 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 RPUSD4Q96CM3 377 aaKnown RBP7.78□□□□□ -1.16
PRDM9-201ENST00000296682 S1PR3Q99500 378 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 TMEM204Q9BSN7 226 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 WSB1Q9Y6I7 421 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 A0A0U1RQK1 487 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 A0A1B0GWJ7 208 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 C7orf77A4D0Y5 90 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 IGHV3-48P01763 117 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 SEC11BP0C7V7 166 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 DANCRP0C864 163 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 HNF1AP20823 631 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 TLE4Q04727 773 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms