RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PPP1R17O96001 155 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 SRSF3P84103 164 aaKnown RBP10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 SLC36A1Q7Z2H8 476 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 RASL11BQ9BPW5 248 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 A0A1B0GX78 115 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 S1PR2O95136 353 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 EML2O95834 649 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 TNXAQ16473 311 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 LRRC29Q8WV35 223 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 CRYGNQ8WXF5 182 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 ZPBPQ9BS86 351 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 WNK3Q9BYP7 1800 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM91Q6ZNR0 172 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 CAMKMTQ7Z624 323 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 HIGD1AQ9Y241 93 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 HYAL1Q12794 435 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 TRAV5A0A0B4J249 113 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 FOXA3P55318 350 aaPredicted RBP10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 CENPWQ5EE01 88 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 SAMD5Q5TGI4 173 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 NAT6Q93015 286 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 ALS2Q96Q42 1657 aa10.27□□□□□ -0.77
SHROOM3-201ENST00000296043 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 FAM157AC9JC47 383 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 KIR3DX1Q9H7L2 352 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 WFDC8Q8IUA0 241 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 P2RX4Q99571 388 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 TBC1D29Q9UFV1 150 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 KCNMB2Q9Y691 235 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 RREB1Q92766 1687 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 MALRD1Q5VYJ5 2156 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 KBTBD11-OT1A0A1B0GTJ5 212 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 OR4C3Q8NH37 302 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 TWSG1Q9GZX9 223 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 OR51B2Q9Y5P1 312 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 SIRT4Q9Y6E7 314 aaPredicted RBP10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 HBBP68871 147 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 ZNF441Q8N8Z8 693 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 WBP2Q969T9 261 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 FOXQ1Q9C009 403 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 GNG3P63215 75 aa10.26□□□□□ -0.77
SHROOM3-201ENST00000296043 UNQ5815/PRO19632Q6UWF5 114 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 RFLNBQ8N5W9 214 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 WFDC5Q8TCV5 224 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 DDX60LQ5H9U9 1706 aaKnown RBP10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 CCL2P13500 99 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 RHBDD1Q8TEB9 315 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 LINC00869P0C866 280 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 HOXC13P31276 330 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 OR52M1Q8NGK5 317 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 AQP10Q96PS8 301 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 TRAV9-2A0A087WT02 112 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 C2orf88Q9BSF0 95 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 GDE1Q9NZC3 331 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 FRG2CA6NGY1 282 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 GPR6P46095 362 aaPredicted RBP10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 LOXL3P58215 753 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 HIST1H2BLQ99880 126 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 IGKV3-7A0A075B6H7 116 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 A0A0U1RQV5 110 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 GAGE13Q4V321 117 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 TEPPQ6URK8 271 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 USP54Q70EL1 1684 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM262E9PQX1 116 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 RAB9AP51151 201 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
SHROOM3-201ENST00000296043 DIRC2Q96SL1 478 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 DEFB127Q9H1M4 99 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 ITGB4P16144 1822 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 ASAH2BP0C7U1 165 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 HCFC2Q9Y5Z7 792 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 TRPM3Q9HCF6 1732 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 IGKV6D-21A0A0A0MT36 114 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 NOGQ13253 232 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 HOGA1Q86XE5 327 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 DHHO43323 396 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 HIST3H2BBQ8N257 126 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 OR5AN1Q8NGI8 311 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 GP6Q9HCN6 339 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 ACSF3Q4G176 576 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 C1QL3Q5VWW1 255 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 FKBP2P26885 142 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 CLEC2AQ6UVW9 174 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 MORN4Q8NDC4 146 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 GRAMD2BQ96HH9 432 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 CYSLTR1Q9Y271 337 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 MRPS18BQ9Y676 258 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 USF3Q68DE3 2245 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 GTF3AQ92664 365 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 FGF21Q9NSA1 209 aa10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 MRPS16Q9Y3D3 137 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-201ENST00000296043 DENND4AQ7Z401 1863 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms