RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LINC00052Q96N35 136 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 SFTA3P0C7M3 94 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 PSG5Q15238 335 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 DHRS7BQ6IAN0 325 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 MMP26Q9NRE1 261 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 THADAQ6YHU6 1953 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 PMCHP20382 165 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 LY6EQ16553 131 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 OR4P4Q8NGL7 312 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 FAM222BQ8WU58 562 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 ZNF426Q9BUY5 554 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 ALX4Q9H161 411 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 SCN2AQ99250 2005 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 SS18L1O75177 396 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 HIST1H1EP10412 219 aaKnown RBP15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 COMPP49747 757 aaPredicted RBP15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 MTCL1Q9Y4B5 1905 aaKnown RBP15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 FABP4P15090 132 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 ABLIM2Q6H8Q1 611 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 DNM1P46Q6ZS02 220 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 SPCS3P61009 180 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 TOMM20LQ6UXN7 152 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 FA2HQ7L5A8 372 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 RCC2Q9P258 522 aaKnown RBP15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 ALPK2Q86TB3 2170 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 HTN1P15515 57 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 RBPMS2Q6ZRY4 209 aaKnown RBP15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 Q96M66 194 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 MANBALQ9NQG1 85 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 DEPPQ9NTK1 212 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 TRAPPC1Q9Y5R8 145 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 IGHV3-21A0A0B4J1V1 117 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 KLF4O43474 513 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 PNKDQ8N490 385 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 OR4A5Q8NH83 315 aa15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 NOL4LQ96MY1 436 aaPredicted RBP15.15■□□□□ 0.02
CDC42EP3-201ENST00000295324 A0A1W2PS18 150 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 THY1P04216 161 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 ZP3P21754 424 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 EWSR1Q01844 656 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 DCAF16Q9NXF7 216 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 GLIPR1P48060 266 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 IQCJQ1A5X6 159 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 TRAV20A0A0B4J274 112 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 RCC1P18754 421 aaPredicted RBP15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 RPL30P62888 115 aaKnown RBP15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 GUCA2BQ16661 112 aa15.14■□□□□ 0.01
CDC42EP3-201ENST00000295324 ANKRD55Q3KP44 614 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 UNQ9370/PRO34162Q6UXP9 181 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 HPXP02790 462 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 HIGD1AQ9Y241 93 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 hCG_38984A0A1B0GV85 526 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 SLC25A17O43808 307 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 CLLU1Q5K131 121 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 CD200R1LQ6Q8B3 271 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 AQP3Q92482 292 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 NRIP2Q9BQI9 281 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 DCTN5Q9BTE1 182 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 PDCD11Q14690 1871 aaKnown RBP15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 HYPMO75409 117 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 FGF8P55075 233 aaPredicted RBP15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 FBLIM1Q8WUP2 373 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 NPVFQ9HCQ7 196 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 MSRB2Q9Y3D2 182 aa15.13■□□□□ 0.01
CDC42EP3-201ENST00000295324 TEX50A0A1B0GTY4 177 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 HLA-DQB1P01920 261 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 SLC35E4Q6ICL7 350 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 LINC00114Q6XXX2 140 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 C16orf82Q7Z2V1 217 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 SLC35B3Q9H1N7 401 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 NPBWR2P48146 333 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 OR4C13Q8NGP0 309 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 CIDEAO60543 219 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 SELENOTP62341 195 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 CENPVQ7Z7K6 275 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 SSBP3Q9BWW4 388 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 C17orf100A8MU93 164 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 SNRNP40Q96DI7 357 aaKnown RBP15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 LYRM2Q9NU23 88 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 CCKARP32238 428 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 OR10D4PQ8NGN7 298 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 C1QTNF5Q9BXJ0 243 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 TMEM222Q9H0R3 208 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 OPN4Q9UHM6 478 aa15.12■□□□□ 0.01
CDC42EP3-201ENST00000295324 CEACAM18A8MTB9 384 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 PLA2G10O15496 165 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 OR2T10Q8NGZ9 312 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 IGHV3OR16-10A0A075B7F0 116 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 PIN1P1O15428 100 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 KHDC3LQ587J8 217 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 ZNRF1Q8ND25 227 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 FAM131CQ96AQ9 280 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 NEUROG3Q9Y4Z2 214 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 GREB1Q4ZG55 1949 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 FAM106AQ4KMX7 169 aa15.11■□□□□ 0.01
CDC42EP3-201ENST00000295324 J3KRW8 73 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 PSG7Q13046 419 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 DGAT2L7PQ6IED9 249 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 CD1BP29016 333 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms