RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZG16O60844 167 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 ABLIM2Q6H8Q1 611 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 SAP25Q8TEE9 199 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 LSM10Q969L4 123 aaKnown RBP12.45□□□□□ -0.42
CCNF-201ENST00000293968 U3KQA8 63 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 DEFB108AA8MXU0 73 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 FGF5P12034 268 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 OR3A1P47881 315 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 TNFRSF9Q07011 255 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 Q6ZS49 121 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 TMPRSS7Q7RTY8 843 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 NOL4LQ96MY1 436 aaPredicted RBP12.45□□□□□ -0.42
CCNF-201ENST00000293968 NDUFAF3Q9BU61 184 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 KNTC1P50748 2209 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 OR2H2O95918 312 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 SERPINA7P05543 415 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 CD33P20138 364 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 HOXA6P31267 233 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 LINC00696Q6ZRV3 163 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 RFESDQ8TAC1 157 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 OR5P3Q8WZ94 311 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 FKBP11Q9NYL4 201 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 TRAV38-1A0A0B4J264 116 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 SAXO1Q8IYX7 474 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 TMEM147Q9BVK8 224 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 BOKQ9UMX3 212 aaPredicted RBP12.44□□□□□ -0.42
CCNF-201ENST00000293968 PATE3B3GLJ2 98 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 SLC25A6P12236 298 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 CNN1P51911 297 aaKnown RBP12.44□□□□□ -0.42
CCNF-201ENST00000293968 TGFBR3Q03167 851 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 ACOT6Q3I5F7 207 aaPredicted RBP12.44□□□□□ -0.42
CCNF-201ENST00000293968 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 H2BFWTQ7Z2G1 175 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 MS4A10Q96PG2 267 aa12.44□□□□□ -0.42
CCNF-201ENST00000293968 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 RNF212BA8MTL3 300 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 NDUFB4O95168 129 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 WNT5AP41221 380 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 LINC00205P59089 165 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 PPP1CBP62140 327 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
CCNF-201ENST00000293968 ALKBH2Q6NS38 261 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 OR1L1Q8NH94 360 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 DTD1Q8TEA8 209 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 GRIFINA4D1Z8 144 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 GCGP01275 180 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 TFF1P04155 84 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 CDC34P49427 236 aaPredicted RBP12.43□□□□□ -0.42
CCNF-201ENST00000293968 TPRX1Q8N7U7 411 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 GABRA2P47869 451 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
CCNF-201ENST00000293968 S1PR2O95136 353 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 KRTAP27-1Q3LI81 207 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 TCF23Q7RTU1 214 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 IGHV3-13P01766 116 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 IGHV3-7P01780 117 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 Q0VFX4 171 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 SP5Q6BEB4 398 aaPredicted RBP12.42□□□□□ -0.42
CCNF-201ENST00000293968 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
CCNF-201ENST00000293968 MAGEA5P43359 124 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 ATP5G3P48201 142 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 TOMM20LQ6UXN7 152 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 NUFIP2Q7Z417 695 aaKnown RBP12.42□□□□□ -0.42
CCNF-201ENST00000293968 TMEM256Q8N2U0 113 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 MSL2Q9HCI7 577 aa12.42□□□□□ -0.42
CCNF-201ENST00000293968 MDFIC2A0A1B0GVS7 189 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 MT-CO3P00414 261 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 MBP02144 154 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 ARR3P36575 388 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 THBS3P49746 956 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 LPAL2Q16609 132 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 COLCA1Q6ZS62 124 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 RTL8AQ9BWD3 113 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 MANBALQ9NQG1 85 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 OR6C3Q9NZP0 311 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 B4GALT7Q9UBV7 327 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 OR5B21A6NL26 309 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 C1QTNF9P0C862 333 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 ZNF25P17030 456 aaPredicted RBP12.41□□□□□ -0.42
CCNF-201ENST00000293968 SGMS2Q8NHU3 365 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 ZDHHC11Q9H8X9 412 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 SH2D2AQ9NP31 389 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 OBP2BQ9NPH6 170 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 FRYLO94915 3013 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 ODAMA1E959 279 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 C17orf112F2Z3M2 114 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 SH2D1BO14796 132 aa12.41□□□□□ -0.42
CCNF-201ENST00000293968 CATR1Q13166 79 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms