RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DPPA3Q6W0C5 159 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 ZNF826PQ6ZT77 177 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 HSD17B11Q8NBQ5 300 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 RDH5Q92781 318 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 LSM10Q969L4 123 aaKnown RBP14.04□□□□□ -0.16
CPSF4-201ENST00000292476 IGHV3-64DA0A0J9YX35 117 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-201ENST00000292476 IRF2P14316 349 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 TFF3Q07654 80 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 PPP1R35Q8TAP8 253 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 Q8TCH9 128 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 ITLN1Q8WWA0 313 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 RAB40CQ96S21 281 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 SH3BGRL3Q9H299 93 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 RNF7Q9UBF6 113 aa14.04□□□□□ -0.16
CPSF4-201ENST00000292476 LRRC30A6NM36 301 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 WRBO00258 174 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 SLC33A1O00400 549 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-201ENST00000292476 HSPB6O14558 160 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 DFFBO76075 338 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 ATP6V0CP27449 155 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 PPT1P50897 306 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 RAB13P51153 203 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 CXorf66Q5JRM2 361 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-201ENST00000292476 ZNF497Q6ZNH5 498 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 C20orf204Q6ZNR8 217 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 MOGAT3Q86VF5 341 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 DMRTC2Q8IXT2 367 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-201ENST00000292476 SLC35B3Q9H1N7 401 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 OR14J1Q9UGF5 321 aa14.03□□□□□ -0.16
CPSF4-201ENST00000292476 E7EQL1 145 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 C19orf84I3L1E1 186 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 SIRPB1O00241 398 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 SERPINE2P07093 398 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 RHEBQ15382 184 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 TMEM182Q6ZP80 229 aaPredicted RBP14.02□□□□□ -0.16
CPSF4-201ENST00000292476 OR2G3Q8NGZ4 309 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 EIF5A2Q9GZV4 153 aaKnown RBP14.02□□□□□ -0.16
CPSF4-201ENST00000292476 DYNLRB1Q9NP97 96 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 BIN3Q9NQY0 253 aa14.02□□□□□ -0.16
CPSF4-201ENST00000292476 CISD1Q9NZ45 108 aaKnown RBP14.02□□□□□ -0.16
CPSF4-201ENST00000292476 COLCA2A8K830 154 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 LHBP01229 141 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 NFYBP25208 207 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 HOXA1P49639 335 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 RPL23AP62750 156 aaKnown RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 RNF212Q495C1 297 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 ZNF787Q6DD87 383 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 FAM213BQ8TBF2 198 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 ATP5SQ99766 215 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 UNKLQ9H9P5 680 aaKnown RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 GCM1Q9NP62 436 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 MBNL3Q9NUK0 354 aaKnown RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 PPP1R3CQ9UQK1 317 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 WIPI2Q9Y4P8 454 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 NBPF19A0A087WUL8 3843 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 MEX3AA1L020 520 aaKnown RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 ZNF672Q499Z4 452 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 SP5Q6BEB4 398 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 STX12Q86Y82 276 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 C1orf87Q8N0U7 546 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 GCSAMQ8N6F7 178 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 OR5C1Q8NGR4 320 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 RXFP4Q8TDU9 374 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 TMEM204Q9BSN7 226 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 LIN7CQ9NUP9 197 aaKnown RBP14.01□□□□□ -0.17
CPSF4-201ENST00000292476 WSB1Q9Y6I7 421 aa14.01□□□□□ -0.17
CPSF4-201ENST00000292476 CADP27708 2225 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 TMEM30CPA0ZSE6 113 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 WNT9BO14905 357 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 CHST1O43916 411 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 PRDX2P32119 198 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 FHITP49789 147 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 DYNLT3P51808 116 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 CLINT1Q14677 625 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 SLC35E4Q6ICL7 350 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 ODF3L1Q8IXM7 274 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 LINC00518Q8N0U6 118 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 PARP12Q9H0J9 701 aaKnown RBP14□□□□□ -0.17
CPSF4-201ENST00000292476 SAP30LQ9HAJ7 183 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 KIAA1456Q9P272 454 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 TRAPPC2LQ9UL33 140 aa14□□□□□ -0.17
CPSF4-201ENST00000292476 HCFC1P51610 2035 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 RNF212BA8MTL3 300 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 TMEM50AO95807 157 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 HBE1P02100 147 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 SULT1A1P50225 295 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 PAX9P55771 341 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 TAS2R30P59541 319 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 PAX5Q02548 391 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 MSMO1Q15800 293 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 AWAT1Q58HT5 328 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 C5orf24Q7Z6I8 188 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 FAM222BQ8WU58 562 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 GPR146Q96CH1 333 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 MAGT1Q9H0U3 335 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 KCNIP1Q9NZI2 227 aa13.99□□□□□ -0.17
CPSF4-201ENST00000292476 CYSRT1A8MQ03 144 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 KIAA1324LA8MWY0 1029 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms