RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 Q8WTZ3 238 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 TMEM204Q9BSN7 226 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 BGLAPP02818 100 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SLC25A5P05141 298 aaKnown RBP9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 FUT5Q11128 374 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 ALKBH6Q3KRA9 238 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SAPCD1Q5SSQ6 148 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SSMEM1Q8WWF3 244 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SLC7A10Q9NS82 523 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 CHD5Q8TDI0 1954 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 OR5B21A6NL26 309 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 RAMP1O60894 148 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 CXorf66Q5JRM2 361 aaPredicted RBP9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 RFESDQ8TAC1 157 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SMIM8Q96KF7 97 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 RNF2Q99496 336 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 PPP1R14DQ9NXH3 145 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 TRBV5-7A0A0A0MS05 114 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 HELTA6NFD8 242 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 FCGR3BO75015 233 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 AESQ08117 197 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 Q8IYB0 196 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 POC1AQ8NBT0 407 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 OR4P4Q8NGL7 312 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 TIMP4Q99727 224 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SH2D2AQ9NP31 389 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 MRPS18CQ9Y3D5 142 aaKnown RBP9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SCN3AQ9NY46 2000 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 SRSF10O75494 262 aaKnown RBP9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 AGAP20933 346 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 PSG5Q15238 335 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 ZNF774Q6NX45 483 aa9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 BARX1Q9HBU1 254 aaPredicted RBP9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 CHCHD2Q9Y6H1 151 aaPredicted RBP9.8□□□□□ -0.84
NPC1L1-201ENST00000289547 TBX6O95947 436 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 MFAP2P55001 183 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 COL10A1Q03692 680 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 ZP4Q12836 540 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 RNF133Q8WVZ7 376 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 AQP3Q92482 292 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 GALNT14Q96FL9 552 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 P2RX4Q99571 388 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 C1QTNF9BB2RNN3 333 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 NDUFA2O43678 99 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 C1QTNF9P0C862 333 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 FSTP19883 344 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 G6PCP35575 357 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 ZXDCQ2QGD7 858 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 NFAM1Q8NET5 270 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 BCL2L2Q92843 193 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 MISP3Q96FF7 219 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 OR2J1Q9GZK6 312 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 ISLRO14498 428 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 NGFP01138 241 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 TCTAP57738 103 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 CLEC2AQ6UVW9 174 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 A0A1B0GU03 582 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 PRSS1P07477 247 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 CXorf67Q86X51 503 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 ALKBH7Q9BT30 221 aaPredicted RBP9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
NPC1L1-201ENST00000289547 PTPRDP23468 1912 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 BCL3P20749 454 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 GNG3P63215 75 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 RTL8BQ17RB0 113 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 KIAA1644Q3SXP7 199 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 C1orf100Q5SVJ3 147 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 POM121L2Q96KW2 1035 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 TMEM38BQ9NVV0 291 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 CA2P00918 260 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 MT-ND6P03923 174 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 UBE2L3P68036 154 aaKnown RBP9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 OR4A4PQ8NGN8 299 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 OR2D2Q9H210 308 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 RTTNQ86VV8 2226 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 TMEM30CPA0ZSE6 113 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 OR8I2Q8N0Y5 310 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 OR1L4Q8NGR5 311 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 RAB37Q96AX2 223 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 DIRC2Q96SL1 478 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 HSPB8Q9UJY1 196 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 LRRC3CA6NJW4 275 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 DEFB108AA8MXU0 73 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 ADH4P08319 380 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 PATE4P0C8F1 98 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 PIGYQ3MUY2 71 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 PYY3Q5JQD4 70 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms