RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ZNF808Q8N4W9 903 aaPredicted RBP11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR51G1Q8NGK1 321 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR10G9Q8NGN4 311 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR10G7Q8NGN6 311 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR1L1Q8NH94 360 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 PYGO2Q9BRQ0 406 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR2D2Q9H210 308 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 AMBPP02760 352 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 SELEP16581 610 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 FGF7P21781 194 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 RPL30P62888 115 aaKnown RBP11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 TFF3Q07654 80 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR1P1Q8NH06 330 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 C5orf30Q96GV9 206 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 OR5B12Q96R08 314 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 POLDIP2Q9Y2S7 368 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 WIPI2Q9Y4P8 454 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 A0A087X0M5 115 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 A0A1B0GX30 115 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 PDGFBP01127 241 aaPredicted RBP11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 CELA3BP08861 270 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 P2RY6Q15077 328 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 Q8IYB0 196 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 ZNF645Q8N7E2 425 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 OR5R1Q8NH85 324 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 TMEM147Q9BVK8 224 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 ODAMA1E959 279 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 LRRC30A6NM36 301 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 PPP5D1E7EU14 171 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 SH2D1BO14796 132 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 S1PR2O95136 353 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 DEFA4P12838 97 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 OR3A1P47881 315 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 MSMO1Q15800 293 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 BCL2L2Q92843 193 aaPredicted RBP11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 OR2J1Q9GZK6 312 aa11.13□□□□□ -0.63
SLC28A1-201ENST00000286749 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 ZG16O60844 167 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 P0C879 139 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 TDGF1P13385 188 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 PMP22Q01453 160 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 ALKBH6Q3KRA9 238 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 PEAR1Q5VY43 1037 aaPredicted RBP11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 OR52L2PQ8NGH6 319 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 WDYHV1Q96HA8 205 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 A0A1B0GV90 55 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 PSPNO60542 156 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 HRASP01112 189 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 GRPP07492 148 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 GZMBP10144 247 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 JOSD1Q15040 202 aaPredicted RBP11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 ZNF146Q15072 292 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 SPINK9Q5DT21 86 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 BTNL3Q6UXE8 466 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 TGIF2LYQ8IUE0 185 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 KCNIP1Q9NZI2 227 aa11.12□□□□□ -0.63
SLC28A1-201ENST00000286749 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 C17orf98A8MV24 154 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 DVL1O14640 695 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 PAGE4O60829 102 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 GYPAP02724 150 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 RAC2P15153 192 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 HOXA4Q00056 320 aaPredicted RBP11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 ATP6V1FQ16864 119 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 SSX9Q7RTT3 188 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 NANOS1Q8WY41 292 aaKnown RBP11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 RAB24Q969Q5 203 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 ACTR3CQ9C0K3 210 aaPredicted RBP11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 MANBALQ9NQG1 85 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 HAND1O96004 215 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 IFNA10P01566 189 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 MBP02144 154 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 PPP1CBP62140 327 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 FBXW9Q5XUX1 488 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 OR10P1Q8NGE3 313 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 GALMQ96C23 342 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 NPCDR1Q9BY65 106 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 URB1O60287 2271 aaKnown RBP11.11□□□□□ -0.63
SLC28A1-201ENST00000286749 SMPD2O60906 423 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 COX5AP20674 150 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 BRWD1-AS2P59051 145 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 OR5T1Q8NG75 326 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms