RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MAP1LC3B2A6NCE7 125 aa8.8□□□□□ -1
SKA1-201ENST00000285116 OR5B21A6NL26 309 aa8.8□□□□□ -1
SKA1-201ENST00000285116 FAM90A26D6RGX4 464 aa8.8□□□□□ -1
SKA1-201ENST00000285116 TMEM250H0YL14 139 aa8.8□□□□□ -1
SKA1-201ENST00000285116 TRAPPC2LH3BP13 241 aa8.8□□□□□ -1
SKA1-201ENST00000285116 NXPH3O95157 252 aa8.8□□□□□ -1
SKA1-201ENST00000285116 SRP14P37108 136 aaKnown RBP8.8□□□□□ -1
SKA1-201ENST00000285116 RPL29P47914 159 aaKnown RBP8.8□□□□□ -1
SKA1-201ENST00000285116 DUSP3P51452 185 aaPredicted RBP8.8□□□□□ -1
SKA1-201ENST00000285116 MEF2BQ02080 365 aaPredicted RBP8.8□□□□□ -1
SKA1-201ENST00000285116 TMEM41BQ5BJD5 291 aa8.8□□□□□ -1
SKA1-201ENST00000285116 SSX7Q7RTT5 188 aa8.8□□□□□ -1
SKA1-201ENST00000285116 PPP1R32Q7Z5V6 425 aa8.8□□□□□ -1
SKA1-201ENST00000285116 MAP1LC3BQ9GZQ8 125 aa8.8□□□□□ -1
SKA1-201ENST00000285116 TIMM9Q9Y5J7 89 aa8.8□□□□□ -1
SKA1-201ENST00000285116 MPC1Q9Y5U8 109 aa8.8□□□□□ -1
SKA1-201ENST00000285116 TLN1Q9Y490 2541 aaKnown RBP8.8□□□□□ -1
SKA1-201ENST00000285116 EPG5Q9HCE0 2579 aa8.8□□□□□ -1
SKA1-201ENST00000285116 NPSP0C0P6 89 aa8.8□□□□□ -1
SKA1-201ENST00000285116 GNB2P62879 340 aa8.8□□□□□ -1
SKA1-201ENST00000285116 OR5P3Q8WZ94 311 aa8.8□□□□□ -1
SKA1-201ENST00000285116 GPR146Q96CH1 333 aa8.8□□□□□ -1
SKA1-201ENST00000285116 IMMP2LQ96T52 175 aa8.8□□□□□ -1
SKA1-201ENST00000285116 RFPL3SP0C7P2 107 aa8.79□□□□□ -1
SKA1-201ENST00000285116 ARR3P36575 388 aa8.79□□□□□ -1
SKA1-201ENST00000285116 TMEM267Q0VDI3 215 aaPredicted RBP8.79□□□□□ -1
SKA1-201ENST00000285116 ANKRD39Q53RE8 183 aa8.79□□□□□ -1
SKA1-201ENST00000285116 ZNF705AQ6ZN79 300 aaPredicted RBP8.79□□□□□ -1
SKA1-201ENST00000285116 ELOVL1Q9BW60 279 aa8.79□□□□□ -1
SKA1-201ENST00000285116 C19orf67A6NJJ6 358 aa8.79□□□□□ -1
SKA1-201ENST00000285116 H3BP45 60 aa8.79□□□□□ -1
SKA1-201ENST00000285116 CNOT4O95628 575 aaKnown RBP8.79□□□□□ -1
SKA1-201ENST00000285116 LCN2P80188 198 aa8.79□□□□□ -1
SKA1-201ENST00000285116 Q0VFX4 171 aa8.79□□□□□ -1
SKA1-201ENST00000285116 PDCD1Q15116 288 aa8.79□□□□□ -1
SKA1-201ENST00000285116 LRRC75BQ2VPJ9 315 aa8.79□□□□□ -1
SKA1-201ENST00000285116 KCNIP4Q6PIL6 250 aa8.79□□□□□ -1
SKA1-201ENST00000285116 MRPL21Q7Z2W9 205 aaKnown RBP8.79□□□□□ -1
SKA1-201ENST00000285116 ZNF525Q8N782 197 aa8.79□□□□□ -1
SKA1-201ENST00000285116 HPRT1P00492 218 aa8.78□□□□□ -1
SKA1-201ENST00000285116 SPINK2P20155 84 aa8.78□□□□□ -1
SKA1-201ENST00000285116 GPM6AP51674 278 aa8.78□□□□□ -1
SKA1-201ENST00000285116 PRSS12P56730 875 aa8.78□□□□□ -1
SKA1-201ENST00000285116 RPS18P62269 152 aaKnown RBP8.78□□□□□ -1
SKA1-201ENST00000285116 ARF1P84077 181 aaKnown RBP8.78□□□□□ -1
SKA1-201ENST00000285116 LHX4Q969G2 390 aa8.78□□□□□ -1
SKA1-201ENST00000285116 RPUSD4Q96CM3 377 aaKnown RBP8.78□□□□□ -1
SKA1-201ENST00000285116 BTF3L4Q96K17 158 aa8.78□□□□□ -1
SKA1-201ENST00000285116 PCSK5Q92824 1860 aa8.78□□□□□ -1
SKA1-201ENST00000285116 ROS1P08922 2347 aa8.78□□□□□ -1
SKA1-201ENST00000285116 A0A0G2JRQ6 117 aa8.78□□□□□ -1
SKA1-201ENST00000285116 J3QW42 95 aa8.78□□□□□ -1
SKA1-201ENST00000285116 MRPL33O75394 65 aaKnown RBP8.78□□□□□ -1
SKA1-201ENST00000285116 SERPINA7P05543 415 aa8.78□□□□□ -1
SKA1-201ENST00000285116 PSMB3P49720 205 aa8.78□□□□□ -1
SKA1-201ENST00000285116 MRPS11P82912 194 aaKnown RBP8.78□□□□□ -1
SKA1-201ENST00000285116 MSMO1Q15800 293 aa8.78□□□□□ -1
SKA1-201ENST00000285116 CLEC12BQ2HXU8 276 aa8.78□□□□□ -1
SKA1-201ENST00000285116 WIPI1Q5MNZ9 446 aaPredicted RBP8.78□□□□□ -1
SKA1-201ENST00000285116 ABHD3Q8WU67 409 aa8.78□□□□□ -1
SKA1-201ENST00000285116 POM121L2Q96KW2 1035 aa8.78□□□□□ -1
SKA1-201ENST00000285116 MS4A10Q96PG2 267 aa8.78□□□□□ -1
SKA1-201ENST00000285116 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
SKA1-201ENST00000285116 COL25A1Q9BXS0 654 aaPredicted RBP8.78□□□□□ -1
SKA1-201ENST00000285116 OPN3Q9H1Y3 402 aaPredicted RBP8.78□□□□□ -1
SKA1-201ENST00000285116 PARLQ9H300 379 aa8.78□□□□□ -1
SKA1-201ENST00000285116 DEPPQ9NTK1 212 aa8.78□□□□□ -1
SKA1-201ENST00000285116 SLC39A9Q9NUM3 307 aa8.78□□□□□ -1
SKA1-201ENST00000285116 BOKQ9UMX3 212 aaPredicted RBP8.78□□□□□ -1
SKA1-201ENST00000285116 TRAV24A0A0B4J272 114 aa8.77□□□□□ -1
SKA1-201ENST00000285116 LNP1A1A4G5 178 aa8.77□□□□□ -1
SKA1-201ENST00000285116 A6NNC1 897 aa8.77□□□□□ -1
SKA1-201ENST00000285116 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1
SKA1-201ENST00000285116 SYNGR2O43760 224 aa8.77□□□□□ -1
SKA1-201ENST00000285116 IGLV2-14P01704 120 aa8.77□□□□□ -1
SKA1-201ENST00000285116 SERPINE2P07093 398 aa8.77□□□□□ -1
SKA1-201ENST00000285116 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1
SKA1-201ENST00000285116 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1
SKA1-201ENST00000285116 HBG1P69891 147 aa8.77□□□□□ -1
SKA1-201ENST00000285116 HBG2P69892 147 aa8.77□□□□□ -1
SKA1-201ENST00000285116 RTP5Q14D33 572 aa8.77□□□□□ -1
SKA1-201ENST00000285116 OR10V1Q8NGI7 309 aa8.77□□□□□ -1
SKA1-201ENST00000285116 HS3ST6Q96QI5 342 aa8.77□□□□□ -1
SKA1-201ENST00000285116 TBX15Q96SF7 602 aa8.77□□□□□ -1
SKA1-201ENST00000285116 IGKV1-39P01597 117 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 IGKV1D-39P04432 117 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 CCL4P13236 92 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 LHX2P50458 406 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 GNG3P63215 75 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 SSPNQ14714 243 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 UBALD2Q8IYN6 164 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 ZCCHC14Q8WYQ9 949 aaKnown RBP8.77□□□□□ -1.01
SKA1-201ENST00000285116 PSMF1Q92530 271 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 MIEN1Q9BRT3 115 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 LIN7CQ9NUP9 197 aaKnown RBP8.77□□□□□ -1.01
SKA1-201ENST00000285116 CRIM1Q9NZV1 1036 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 TNFSF12O43508 249 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 VENTXO95231 258 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 GYPAP02724 150 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 IRF2P14316 349 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms