RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CRLF2Q9HC73 371 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 PRSS50Q9UI38 385 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 DNAJC13O75165 2243 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 NPIPB11E5RHQ5 1161 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 NPIPA3F8WFD2 350 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 AGFG2O95081 481 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 VENTXO95231 258 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 METTL15P1P0C7V9 234 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 GDF1P27539 372 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 CA7P43166 264 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 C3AR1Q16581 482 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 DMRTC1Q5HYR2 192 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 NCR3LG1Q68D85 454 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 LINC00596Q86U02 117 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 IMMP2LQ96T52 175 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF442Q9H7R0 627 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 B4GALT7Q9UBV7 327 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 GTF3C1Q12789 2109 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 TRGV8A0A0C4DH27 118 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 XKRY2A2RUG3 117 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 CNOT4O95628 575 aaKnown RBP8.74□□□□□ -1.01
UPF3B-201ENST00000276201 HRASP01112 189 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 F2RP25116 425 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 LCN2P80188 198 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF880Q6PDB4 577 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 C16orf82Q7Z2V1 217 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 TGIF2LXQ8IUE1 241 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 FAM57AQ8TBR7 257 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 GPR146Q96CH1 333 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 OR5B12Q96R08 314 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 ULBP2Q9BZM5 246 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 SH3BGRL2Q9UJC5 107 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 ATP23Q9Y6H3 246 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 PTPN13Q12923 2485 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 DOPEY1Q5JWR5 2465 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 DOPEY2Q9Y3R5 2298 aa8.74□□□□□ -1.01
UPF3B-201ENST00000276201 TRGV5A0A0B4J1U4 118 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 KIR2DL5BA0A0G2JN68 375 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 KIR2DL5BA0A0G2JPC4 375 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 M0QZK8 103 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 PGLYRP1O75594 196 aaPredicted RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF205O95201 554 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 GLI4P10075 376 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 CD99P14209 185 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 HBG1P69891 147 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 HBG2P69892 147 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 TNFRSF9Q07011 255 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 DOLPP1Q86YN1 238 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 KIR2DL5AQ8N109 375 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM217Q8N7C4 229 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF385AQ96PM9 386 aaKnown RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 RBM24Q9BX46 236 aaKnown RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 CHODLQ9H9P2 273 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 MANBALQ9NQG1 85 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM38BQ9NVV0 291 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 SPRR3Q9UBC9 169 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 SPTAN1Q13813 2472 aaKnown RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 USP9YO00507 2555 aaPredicted RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 DIDO1Q9BTC0 2240 aaKnown RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 FAM221AA4D161 298 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 MAP1LC3B2A6NCE7 125 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM210A6NLX4 147 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 AQP7O14520 342 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 ERVFC1-1P60608 527 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 FGF12P61328 243 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 PCBD1P61457 104 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 SPIN3Q5JUX0 258 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 C1orf194Q5T5A4 169 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 BTNL3Q6UXE8 466 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 P4HA3Q7Z4N8 544 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 MAP1LC3BQ9GZQ8 125 aa8.73□□□□□ -1.01
UPF3B-201ENST00000276201 WDR61Q9GZS3 305 aaKnown RBP8.73□□□□□ -1.01
UPF3B-201ENST00000276201 IGKV1D-13A0A0B4J2D9 117 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 ZFP92A6NM28 416 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 H7BYZ3 331 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 TRAPPC6AO75865 159 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 LCATP04180 440 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 IGKV1-13P0DP09 117 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 GALR1P47211 349 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 CASP6P55212 293 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 DSCR4P56555 118 aaPredicted RBP8.72□□□□□ -1.01
UPF3B-201ENST00000276201 RPL23P62829 140 aaKnown RBP8.72□□□□□ -1.01
UPF3B-201ENST00000276201 MEF2BQ02080 365 aaPredicted RBP8.72□□□□□ -1.01
UPF3B-201ENST00000276201 GAGE1Q13065 139 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 HERPUD1Q15011 391 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM249Q2WGJ8 235 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 NRN1LQ496H8 165 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 SLC25A24Q6NUK1 477 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 OR2AE1Q8NHA4 323 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 PRDM14Q9GZV8 571 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 OR6C3Q9NZP0 311 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 GJE1A6NN92 205 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 CEBPZOSA8MTT3 80 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 M0R143 59 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 CCL21O00585 134 aa8.72□□□□□ -1.01
UPF3B-201ENST00000276201 PRRG2O14669 202 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms