RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ZNF79Q15937 498 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 OR10AC1Q8NH08 325 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 UBE2L6O14933 153 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 PLA2G10O15496 165 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 MPZL1O95297 269 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 DDTP30046 118 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 FBXW9Q5XUX1 488 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 GALNT14Q96FL9 552 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 PLPPR2Q96GM1 343 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 TRPM7Q96QT4 1865 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 HSPB9Q9BQS6 159 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 INSIG2Q9Y5U4 225 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 CEACAM21Q3KPI0 293 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 HES3Q5TGS1 186 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 SLC25A34Q6PIV7 304 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 ACACAQ13085 2346 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 PAPPA-AS1Q5QFB9 102 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM78Q5T7P6 136 aa6.95□□□□□ -1.3
LIMD1-201ENST00000273317 MAS1LP35410 378 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 EBLN2Q6P2I7 272 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 AURKAIP1Q9NWT8 199 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PXMP4Q9Y6I8 212 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 MAFAQ8NHW3 353 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 DDA1Q9BW61 102 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 HSPB7Q9UBY9 170 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 MBD1Q9UIS9 605 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TANC2Q9HCD6 1990 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ZSWIM8A7E2V4 1837 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TRAV8-7A0A075B6U6 113 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TRBV5-5A0A0J9YX44 114 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ECSCRQ19T08 205 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PSMG4Q5JS54 123 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM136Q6ZRR5 245 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM183AQ8IXX5 376 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 LRRC75AQ8NAA5 344 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 AQP3Q92482 292 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 MOB4Q9Y3A3 225 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 SOX8P57073 446 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 CD300CQ08708 224 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 AQP10Q96PS8 301 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 LOC389332A0A1B0GUA5 103 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 MPTX1A8MV57 137 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 RPS11P62280 158 aaKnown RBP eCLIP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PRSS41Q7RTY9 318 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 KCNE5Q9UJ90 142 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 COL11A2P13942 1736 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ARHGAP21Q5T5U3 1957 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 LOC285556D6RIA3 1793 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PLXND1Q9Y4D7 1925 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ISG15P05161 165 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF841Q6ZN19 808 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 OR8G5Q8NG78 346 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 OR1K1Q8NGR3 316 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ALG14Q96F25 216 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 DMRTA2Q96SC8 542 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 CLDN14O95500 239 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 HOXB3P14651 431 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TM4SF20Q53R12 229 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 FAM27BQ5VT28 67 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF880Q6PDB4 577 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PCOLCE2Q9UKZ9 415 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 GREB1LQ9C091 1923 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 LRRC37AA6NMS7 1700 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 CEACAM18A8MTB9 384 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 CCL2P13500 99 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 MC5RP33032 325 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 P2RY6Q15077 328 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 FAM53AQ6NSI3 398 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 VCX2Q9H322 139 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 LTBP4Q8N2S1 1624 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 OR2A4O95047 310 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PPP1R17O96001 155 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 OR4A5Q8NH83 315 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF714Q96N38 554 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 OR2A7Q96R45 310 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 PSMG3Q9BT73 122 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-201ENST00000273317 SERGEFQ9UGK8 458 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM56-RWDD3S4R434 201 aa6.94□□□□□ -1.3
LIMD1-201ENST00000273317 TRAV30A0A087WSZ9 112 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 TSPOP30536 169 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF502Q8TBZ5 544 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RND1Q92730 232 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 NPVFQ9HCQ7 196 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 METTL1Q9UBP6 276 aaKnown RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 CDIPTO14735 213 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RPS4XP62701 263 aaKnown RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 KLRB1Q12918 225 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 IBA57Q5T440 356 aaKnown RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 CBLN3Q6UW01 205 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 AMER3Q8N944 861 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 OR10AG1Q8NH19 301 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 WIPI2Q9Y4P8 454 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 ARHGAP32A7KAX9 2087 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms