RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 A0A1B0GU03 582 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 PPP1R2P9O14990 202 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 COX5AP20674 150 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 UCP3P55916 312 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 GFRALQ6UXV0 394 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 OR51I2Q9H344 312 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 YLPM1P49750 1951 aaKnown RBP10.61□□□□□ -0.71
UBXN4-201ENST00000272638 OOEPA6NGQ2 149 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 IGHV3-48P01763 117 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 UCP1P25874 307 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 MDH2P40926 338 aaKnown RBP10.61□□□□□ -0.71
UBXN4-201ENST00000272638 BTNL8Q6UX41 500 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 FOXL2NBQ6ZUU3 175 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 EIF4E3Q8N5X7 224 aaKnown RBP10.61□□□□□ -0.71
UBXN4-201ENST00000272638 OR8G5Q8NG78 346 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 RNF138Q8WVD3 245 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 GTF3AQ92664 365 aaKnown RBP10.61□□□□□ -0.71
UBXN4-201ENST00000272638 RBKSQ9H477 322 aa10.61□□□□□ -0.71
UBXN4-201ENST00000272638 BARX1Q9HBU1 254 aaPredicted RBP10.61□□□□□ -0.71
UBXN4-201ENST00000272638 C17orf112F2Z3M2 114 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 MKRN2OSH3BPM6 223 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 MST1LQ2TV78 715 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 RPL39P5Q59GN2 51 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 WDR25Q64LD2 544 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 Q6ZRM9 215 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 OR5D13Q8NGL4 314 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 ACY3Q96HD9 319 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 LRFN3Q9BTN0 628 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 ACTR3CQ9C0K3 210 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 VSIRQ9H7M9 311 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 SPTBN4Q9H254 2564 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 IGKV3D-15A0A087WSY6 115 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 PAGE4O60829 102 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 CYB5R3P00387 301 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 Q6ZT83 130 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 FGF23Q9GZV9 251 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 IL36GQ9NZH8 169 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 WIPI2Q9Y4P8 454 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 GYPAP02724 150 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 COX5BP10606 129 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 CTRB1P17538 263 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 CTRB2Q6GPI1 263 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 USB1Q9BQ65 265 aaKnown RBP10.6□□□□□ -0.71
UBXN4-201ENST00000272638 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 LRP4O75096 1905 aa10.6□□□□□ -0.71
UBXN4-201ENST00000272638 ANKRD11Q6UB99 2663 aaPredicted RBP10.59□□□□□ -0.71
UBXN4-201ENST00000272638 OR7C2O60412 319 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 C1orf87Q8N0U7 546 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 COMMD1Q8N668 190 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 TRGV10A0A0A0MS01 117 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 TMEM50AO95807 157 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 OR10D4PQ8NGN7 298 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 PKIBQ9C010 78 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 DOK5Q9P104 306 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 A0A1W2PRD5 423 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 A0A1W2PRF3 423 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 A0A1W2PRM7 423 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 DVL1O14640 695 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 ZNF883P0CG24 379 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 GNB1P62873 340 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 TAAR6Q96RI8 345 aa10.59□□□□□ -0.71
UBXN4-201ENST00000272638 PRR33A8MZF0 331 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 GABRA6Q16445 453 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 RPRMLQ8N4K4 120 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 OR10X1Q8NGY0 326 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 MALSU1Q96EH3 234 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 ANKHD1Q8IWZ3 2542 aaKnown RBP10.58□□□□□ -0.72
UBXN4-201ENST00000272638 CEP192Q8TEP8 1941 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A10PA6NDY2 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A18PA6NE21 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A16PA6NEW6 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A20PA6NIJ5 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A8PA6NJQ4 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A7PA6NKC0 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A22PA8MWA6 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A12PA8MX19 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A5PA8MXJ8 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A23PA8MXZ1 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 TOX4O94842 621 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 NAPSAO96009 420 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A15PP0C7V4 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A13PP0C7W8 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A14PP0C7W9 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A24PP0C7X0 464 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 MGST1P10620 155 aaKnown RBP10.58□□□□□ -0.72
UBXN4-201ENST00000272638 RPP30P78346 268 aaKnown RBP10.58□□□□□ -0.72
UBXN4-201ENST00000272638 HFEQ30201 348 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 H1FOOQ8IZA3 346 aaPredicted RBP10.58□□□□□ -0.72
UBXN4-201ENST00000272638 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FAM208BQ5VWN6 2430 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 TGIF2-C20orf24A0A0A6YYL0 155 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 PPP5D1E7EU14 171 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms