RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 AKR1D1P51857 326 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 QRFPP83859 136 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 IZUMO4Q1ZYL8 232 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 TRANK1O15050 2925 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 DUXBA0A1W2PPF3 345 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 P2RY1P47900 373 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 TOR2AQ5JU69 321 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 POMT1Q9Y6A1 747 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 PDLIM4P50479 330 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 MMDQ15546 238 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 RPS10P5Q9NQ39 176 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 RPH3ALQ9UNE2 315 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 PUS1Q9Y606 427 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 ATRXP46100 2492 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 A0A0B4J293 547 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 F2RL2O00254 374 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 LIPFP07098 398 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 APELAP0DMC3 54 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 DYNLT3P51808 116 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 KHDC1LQ5JSQ8 128 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 SIGIRRQ6IA17 410 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 PIMREGQ9BSJ6 248 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 TNFRSF19Q9NS68 423 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 PLCE1Q9P212 2302 aa12.16□□□□□ -0.46
PDLIM2-201ENST00000265810 TXNL1O43396 289 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 SELLP14151 372 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 CXorf66Q5JRM2 361 aaPredicted RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 ANKRD34BA5PLL1 514 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 RRASP10301 218 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 SOHLH1Q5JUK2 328 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 DHRS11Q6UWP2 260 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 OR9G1Q8NH87 305 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 PERPQ96FX8 193 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 OR5AC2Q9NZP5 309 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 RCC2Q9P258 522 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 MED19A0JLT2 244 aaPredicted RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 NUPL2O15504 423 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 PSPNO60542 156 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 GAPDHP04406 335 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 SNRNP70P08621 437 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 SLC25A6P12236 298 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 ZNF250P15622 560 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 HAGHQ16775 308 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 Q5BKY6 102 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
PDLIM2-201ENST00000265810 LY86O95711 162 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 FABP1P07148 127 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 ZNF146Q15072 292 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 RPL39P5Q59GN2 51 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 ZNF497Q6ZNH5 498 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 SELENOHQ8IZQ5 122 aaKnown RBP12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 NUP37Q8NFH4 326 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 RTBDNQ9BSG5 229 aaPredicted RBP12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 PRNDQ9UKY0 176 aa12.15□□□□□ -0.47
PDLIM2-201ENST00000265810 CCL3L1P16619 93 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 UBE2KP61086 200 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM187Q14656 261 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 GPR146Q96CH1 333 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 OR5B12Q96R08 314 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 ACTR3CQ9C0K3 210 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 KBTBD11-OT1A0A1B0GTJ5 212 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 NCMAPQ5T1S8 102 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 HES4Q9HCC6 221 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 J3QR06 171 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 CD37P11049 281 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 M6PRP20645 277 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 S100PP25815 95 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 PSMB3P49720 205 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 PRUNE2Q8WUY3 3088 aa12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDLIM2-201ENST00000265810 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 ZNF735P0CB33 412 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 EWSR1Q01844 656 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 PNKDQ8N490 385 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 TNFSF18Q9UNG2 199 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 MMP24Q9Y5R2 645 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 A0A1W2PN81 502 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 KRBOX1C9JBD0 128 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 S1PR2O95136 353 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms