RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TMEM33P57088 247 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 ZNF816Q0VGE8 651 aaPredicted RBP13.05□□□□□ -0.32
VPS26A-201ENST00000263559 ZNF66Q6ZN08 573 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 PHYHIPLQ96FC7 376 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 BSCL2Q96G97 398 aaPredicted RBP13.05□□□□□ -0.32
VPS26A-201ENST00000263559 C19orf12Q9NSK7 152 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 hADV38S2A0JD32 116 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 B8ZZF3 427 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 SSSCA1O60232 199 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 HSD17B10Q99714 261 aaKnown RBP13.05□□□□□ -0.32
VPS26A-201ENST00000263559 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 LINC00574Q9H8X3 128 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 IDI2-AS1Q9NZ38 188 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 CTSZQ9UBR2 303 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 CACNG5Q9UF02 275 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 FBXL17Q9UF56 701 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 AUP1Q9Y679 476 aa13.05□□□□□ -0.32
VPS26A-201ENST00000263559 A0A1W2PPE3 182 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 TAAR5O14804 337 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 GPR137BO60478 399 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 NFYBP25208 207 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 ZNF273Q14593 569 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 RPL7L1Q6DKI1 246 aaKnown RBP13.04□□□□□ -0.32
VPS26A-201ENST00000263559 FAM216AQ8WUB2 273 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 LINC00312Q9Y6C7 94 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 KIAA1324LA8MWY0 1029 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-201ENST00000263559 NDUFB3O43676 98 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 PPOXP50336 477 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
VPS26A-201ENST00000263559 CT45A1Q5HYN5 189 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 GPR157Q5UAW9 335 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 CT45A3Q8NHU0 189 aa13.04□□□□□ -0.32
VPS26A-201ENST00000263559 ANKRD34BA5PLL1 514 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 S1PR2O95136 353 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 DUTP33316 252 aaKnown RBP13.03□□□□□ -0.32
VPS26A-201ENST00000263559 ERVFRD-1P60508 538 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 RPL39P5Q59GN2 51 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 CXorf58Q96LI9 332 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 ABHD14AQ9BUJ0 271 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 KAAG1Q9UBP8 84 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 FAM24AA6NFZ4 105 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 DVL1O14640 695 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 ITGB1BP1O14713 200 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 CHST1O43916 411 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 KRASP01116 189 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 PVALBP20472 110 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-201ENST00000263559 NHLH2Q02577 135 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 MEF2CQ06413 473 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-201ENST00000263559 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 NCR3LG1Q68D85 454 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 C1orf229Q6ZS94 237 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-201ENST00000263559 OR2C3Q8N628 320 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 TCTEX1D1Q8N7M0 179 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 SLC25A32Q9H2D1 315 aa13.03□□□□□ -0.32
VPS26A-201ENST00000263559 HRNRQ86YZ3 2850 aaPredicted RBP13.02□□□□□ -0.32
VPS26A-201ENST00000263559 TMEM50AO95807 157 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 AGAP20933 346 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 G6PCP35575 357 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 LRRC10Q5BKY1 277 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 TMEM200BQ69YZ2 307 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 H1FXQ92522 213 aaKnown RBP13.02□□□□□ -0.32
VPS26A-201ENST00000263559 CBLN4Q9NTU7 201 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.32
VPS26A-201ENST00000263559 IGSF10Q6WRI0 2623 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 RRASP10301 218 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 RAB7AP51149 207 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 COMMD7Q86VX2 200 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 PDZD9Q8IXQ8 264 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 ZNF439Q8NDP4 499 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 FAM212BQ9NTI7 297 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-201ENST00000263559 MMP24Q9Y5R2 645 aa13.02□□□□□ -0.33
VPS26A-201ENST00000263559 M0R1X1 148 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 WRBO00258 174 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 NDUFA2O43678 99 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 CCL3L1P16619 93 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 CAV2P51636 162 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 VAMP2P63027 116 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 RPUSD1Q9UJJ7 312 aaKnown RBP13.01□□□□□ -0.33
VPS26A-201ENST00000263559 SOD3P08294 240 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 PAX9P55771 341 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 EWSR1Q01844 656 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS26A-201ENST00000263559 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-201ENST00000263559 GAB2Q9UQC2 676 aa13.01□□□□□ -0.33
VPS26A-201ENST00000263559 A0A1W2PPR1 153 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 IGSF23A1L1A6 192 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 C19orf84I3L1E1 186 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 P0C879 139 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 GNG10P50151 68 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 ODF3L1Q8IXM7 274 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 ZNF714Q96N38 554 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 GAL3ST2Q9H3Q3 398 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 GAPDHP04406 335 aaKnown RBP13□□□□□ -0.33
VPS26A-201ENST00000263559 MMP9P14780 707 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms