RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PTX4Q96A99 478 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 SRSF10O75494 262 aaKnown RBP11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 EFEMP2O95967 443 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 FOSL1P15407 271 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 RELBQ01201 579 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 PLAC1Q9HBJ0 212 aa11.62□□□□□ -0.55
PDGFRB-201ENST00000261799 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 UBE2DNLQ8IWF7 75 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 PRSS27Q9BQR3 290 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 A0A0G2JMZ2 1700 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 LRRC37A2A6NM11 1700 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 PACRGQ96M98 296 aaPredicted RBP11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 SEC11CQ9BY50 192 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 TUBD1Q9UJT1 453 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 SPINK4O60575 86 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 FSTP19883 344 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 ADAD2Q8NCV1 583 aaKnown RBP11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 WDFY2Q96P53 400 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 HDHD3Q9BSH5 251 aaPredicted RBP11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 WSB1Q9Y6I7 421 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 C4orf51C9J302 202 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 H0Y980 276 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 OR4A47Q6IF82 309 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 BPIFA4PQ86YQ2 179 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 LHFPL6Q9Y693 200 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 C11orf94C9JXX5 98 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 FAM157CP0CG43 387 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 EFNA4P52798 201 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 TWIST1Q15672 202 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 SH3BGRL3Q9H299 93 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 NPVFQ9HCQ7 196 aa11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 LYRM2Q9NU23 88 aaPredicted RBP11.61□□□□□ -0.55
PDGFRB-201ENST00000261799 GPX1P07203 203 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 PMCHP20382 165 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 MAS1LP35410 378 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 TMEM33P57088 247 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 GUK1Q16774 197 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 LOC102723996A0A087X1L8 192 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 IGLV1-36A0A0B4J1U3 117 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 TMEM262E9PQX1 116 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 MFNGO00587 321 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 PDE6DO43924 150 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 CDS2O95674 445 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 KRTDAPP60985 99 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 MEF2CQ06413 473 aaPredicted RBP11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 CTHRC1Q96CG8 243 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 CAMPP49913 170 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 BAK1Q16611 211 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 SOSTQ9BQB4 213 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 TMEM140Q9NV12 185 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 IGKV3D-11A0A0A0MRZ8 115 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 MOSP00540 346 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 FAM209BQ5JX69 171 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 SLC35E4Q6ICL7 350 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 FAM90A1Q86YD7 464 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 MYOZ3Q8TDC0 251 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 LEAP2Q969E1 77 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 DCAF16Q9NXF7 216 aa11.6□□□□□ -0.55
PDGFRB-201ENST00000261799 CD1AP06126 327 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 PRSS1P07477 247 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 TIMP3P35625 211 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 NXF2Q9GZY0 626 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 TOLLIPQ9H0E2 274 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 MPC2O95563 127 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 RNF224P0DH78 156 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 OR10J1P30954 320 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 SNURFLB1AK76 121 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 SRD5A1P18405 259 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 CD33P20138 364 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 LHX2P50458 406 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 RELL2Q8NC24 303 aaPredicted RBP11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 ZNFX1Q9P2E3 1918 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 URB1O60287 2271 aaKnown RBP11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 SFTA3P0C7M3 94 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 SLC25A16P16260 332 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 GLIPR1P48060 266 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 ISG15P05161 165 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 MMP26Q9NRE1 261 aa11.59□□□□□ -0.55
PDGFRB-201ENST00000261799 FCN1O00602 326 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 ZIC3O60481 467 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 RANP62826 216 aaKnown RBP11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 CD69Q07108 199 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 TMEM255AQ5JRV8 349 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 GSX2Q9BZM3 304 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 AKIRIN1Q9H9L7 192 aaPredicted RBP11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 G6PC2Q9NQR9 355 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 RND2P52198 227 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 MIEN1Q9BRT3 115 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms