RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 CBLN3Q6UW01 205 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 GLRX5Q86SX6 157 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 LINC00596Q86U02 117 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 GON4LQ3T8J9 2241 aa9.34□□□□□ -0.91
SLC6A4-201ENST00000261707 UBR2Q8IWV8 1755 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 ZNF735P0CB33 412 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 HTN3P15516 51 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 SPINK2P20155 84 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 RPS11P62280 158 aaKnown RBP eCLIP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 CXorf66Q5JRM2 361 aaPredicted RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 LINC01465Q8N7H1 131 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 LHX9Q9NQ69 397 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 CCL27Q9Y4X3 112 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 NDUFS6O75380 124 aaKnown RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 SMAGPQ0VAQ4 97 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 FUT5Q11128 374 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 ISXQ2M1V0 245 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 GCSAMLQ5JQS6 135 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 OR4D5Q8NGN0 318 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 WNT5BQ9H1J7 359 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 C21orf140B9A014 251 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 TYMSP04818 313 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 HOXC4P09017 264 aaPredicted RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 P2RY6Q15077 328 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 C1orf162Q8NEQ5 155 aaPredicted RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 AQP3Q92482 292 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 SPAG8Q99932 426 aaPredicted RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 RNF122Q9H9V4 155 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 S1PR2O95136 353 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 TMEM177Q53S58 311 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 EBLN2Q6P2I7 272 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 HSPB7Q9UBY9 170 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 ARID1BQ8NFD5 2236 aaPredicted RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 RBM11P57052 281 aaKnown RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 LCN2P80188 198 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 SELENOHQ8IZQ5 122 aaKnown RBP9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 RAXQ9Y2V3 346 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 SHROOM3Q8TF72 1996 aa9.33□□□□□ -0.92
SLC6A4-201ENST00000261707 LY6EQ16553 131 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 CD200R1LQ6Q8B3 271 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 Q6ZNB5 142 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 DUX5Q96PT3 197 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 MS4A5Q9H3V2 200 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 A0A1W2PRX2 142 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 SYNGR1O43759 233 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 PRSS2P07478 247 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 FSTP19883 344 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 LSM6P62312 80 aaKnown RBP9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 C2orf83Q53S99 150 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 C5orf30Q96GV9 206 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 IGHV1OR15-9A0A0B4J2B8 117 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 J3QR06 171 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 NUBP1P53384 320 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 TMEM196Q5HYL7 178 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 POC1AQ8NBT0 407 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 CHRNA10Q9GZZ6 450 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 PATE3B3GLJ2 98 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 TSPAN2O60636 221 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 VENTXO95231 258 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 OR4C13Q8NGP0 309 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 ZPLD1Q8TCW7 415 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 NEUROG1Q92886 237 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 SPSB4Q96A44 273 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 IMMP2LQ96T52 175 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 GLRX2Q9NS18 164 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 HIST1H1AQ02539 215 aaPredicted RBP9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 KRTCAP3Q53RY4 240 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 MIC13Q5XKP0 118 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 PRSS41Q7RTY9 318 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 MRGPRX3Q96LB0 322 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 SGK494Q96LW2 274 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 HILPDAQ9Y5L2 63 aa9.32□□□□□ -0.92
SLC6A4-201ENST00000261707 TRBV5-5A0A0J9YX44 114 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 TTC9CQ8N5M4 171 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 MOB4Q9Y3A3 225 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 DLEU1O43261 78 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 HYPMO75409 117 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 IGHV4-34P06331 123 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 GPR183P32249 361 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 CKS1BP61024 79 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 LRRC75BQ2VPJ9 315 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 LINC01555Q8NAE3 123 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 LOXL4Q96JB6 756 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 SP9P0CG40 484 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 GFRA1P56159 465 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 BEND2Q8NDZ0 799 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 TMEM160Q9NX00 188 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 A0A1B0GUL6 1792 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 PLCH1Q4KWH8 1693 aa9.31□□□□□ -0.92
SLC6A4-201ENST00000261707 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms