RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 TRAV30A0A087WSZ9 112 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 IGHV3-20A0A0C4DH32 117 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 IGKV1-6A0A0C4DH72 117 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 KIR2DS1A0A191URI9 304 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 DPRXA6NFQ7 191 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 SNURFLB1AK76 121 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 CLDN1O95832 211 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 CTXN2P0C2S0 81 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF16P17020 682 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-201ENST00000261443 PMCHP20382 165 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 KIR2DS4P43632 304 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 CARD18P57730 90 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 PSG4Q00888 419 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 KIR2DS1Q14954 304 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 HLA-DRB5Q30154 266 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 LDLRAD2Q5SZI1 272 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 SAXO1Q8IYX7 474 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 SLC22A18ASQ8N1D0 253 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 OR2M3Q8NG83 312 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 PIGCQ92535 297 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 LSM10Q969L4 123 aaKnown RBP6.13□□□□□ -1.43
CSDE1-201ENST00000261443 SGCZQ96LD1 299 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 PLA2G2FQ9BZM2 168 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 GNB4Q9HAV0 340 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 MRPS16Q9Y3D3 137 aaKnown RBP6.13□□□□□ -1.43
CSDE1-201ENST00000261443 IGKV1-39P01597 117 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 IGKV1D-39P04432 117 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 TIMP3P35625 211 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 GFERP55789 205 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM240Q5SV17 173 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF611Q8N823 705 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 SLC24A4Q8NFF2 622 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 NABP1Q96AH0 204 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 KLHDC7BQ96G42 594 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 MTIF3Q9H2K0 278 aaKnown RBP6.13□□□□□ -1.43
CSDE1-201ENST00000261443 IL23AQ9NPF7 189 aa6.13□□□□□ -1.43
CSDE1-201ENST00000261443 ERRFI1Q9UJM3 462 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-201ENST00000261443 A0A1W2PQF6 199 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 AQP7P3A6NL99 342 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 IGKV1-5P01602 117 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CAPZBP47756 277 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CDC34P49427 236 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TFF3Q07654 80 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 DAZAP2Q15038 168 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 SRSF7Q16629 238 aaKnown RBP eCLIP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 KRTCAP3Q53RY4 240 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 OCIAD2Q56VL3 154 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 SHISA6Q6ZSJ9 500 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM147Q9BVK8 224 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CSTL1Q9H114 145 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 KCNIP2Q9NS61 270 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 GPR27Q9NS67 375 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 RBM7Q9Y580 266 aaKnown RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 ATP23Q9Y6H3 246 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TRAV9-1A0A075B6T8 112 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 RNF212BA8MTL3 300 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 SLC17A3O00476 420 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 DEGS1O15121 323 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 DHHO43323 396 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 FBLP22087 321 aaKnown RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CLEC2AQ6UVW9 174 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM14EPQ6UXP3 125 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 RDH5Q92781 318 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 APOBEC3DQ96AK3 386 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 GMPPAQ96IJ6 420 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 STRADBQ9C0K7 418 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 IL36BQ9NZH7 164 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 OR2W1Q9Y3N9 320 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TRBV20OR9-2A0A075B6H5 130 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 IGHV2-26A0A0B4J1V2 119 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 IGHV1-69-2A0A0G2JMI3 117 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 C5orf67F2Z3F1 127 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 WDR1O75083 606 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 C3orf79P0CE67 100 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 PRRX1P54821 245 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 FOXL2P58012 376 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 SLC25A53Q5H9E4 307 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 C10orf128Q5T292 105 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM42Q69YG0 159 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 TMPRSS7Q7RTY8 843 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 ERASQ7Z444 233 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 OCC1Q8TAD7 63 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CLDN23Q96B33 292 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 KCNS1Q96KK3 526 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 QTRT1Q9BXR0 403 aaKnown RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CDC42EP3Q9UKI2 254 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 PPP1R3CQ9UQK1 317 aa6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CHTOPQ9Y3Y2 248 aaKnown RBP6.12□□□□□ -1.43
CSDE1-201ENST00000261443 CABIN1Q9Y6J0 2220 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 A0A1W2PS18 150 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 FRMD6-AS1P0C7T7 363 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 BCL3P20749 454 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 TNFRSF4P43489 277 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 RHBDD2Q6NTF9 364 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 OR5B3Q8NH48 314 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 BADQ92934 168 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms