RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 KIR3DP1A8MWS1 328 aa7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 FOLR3P41439 243 aa7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 CCL14Q16627 93 aa7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 LDLRAD1Q5T700 205 aa7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 Q6ZSR6 202 aa7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 VSTM2AQ8TAG5 236 aa7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 THAP10Q9P2Z0 257 aaPredicted RBP7.23□□□□□ -1.25
SNCAIP-201ENST00000261367 LAMTOR5O43504 91 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 HMGA1P17096 107 aaKnown RBP7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 RELBQ01201 579 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 MLF2Q15773 248 aaPredicted RBP7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 VMA21Q3ZAQ7 101 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 TSPO2Q5TGU0 170 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 STRADBQ9C0K7 418 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 OOEPA6NGQ2 149 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 NPIPB13A6NJU9 1138 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 NPIPB4C9JG80 1138 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 J3QR06 171 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 ASAH2BP0C7U1 165 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 TPTE2P1Q5T6R2 138 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 C5orf17Q8NAS9 161 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 CCL28Q9NRJ3 127 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 PXMP4Q9Y6I8 212 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 KNL1Q8NG31 2342 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 TNFSF11O14788 317 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 CFIP05156 583 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 Q6AWC8 147 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 SAXO1Q8IYX7 474 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 OR10D3Q8NH80 312 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 APOBEC4Q8WW27 367 aaKnown RBP7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 FRMPD3Q5JV73 1810 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 GAGE12BA1L429 117 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 H3BUT2 72 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 IGHMP01871 453 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 CBLN1P23435 193 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 GDF1P27539 372 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 DLX1P56177 255 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 ATP5L2Q7Z4Y8 100 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 LRRC75AQ8NAA5 344 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 SLC25A28Q96A46 364 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 SARGQ9BW04 601 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 TM2D1Q9BX74 207 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 OSTCQ9NRP0 149 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
SNCAIP-201ENST00000261367 NGFRP08138 427 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 ZNF735P0CB33 412 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 CCL5P13501 91 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 AREGP15514 252 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 TSPOP30536 169 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 OTX1P32242 354 aaPredicted RBP7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 ADMP35318 185 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 RBM11P57052 281 aaKnown RBP7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 C10orf113Q5VZT2 155 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 CADM4Q8NFZ8 388 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 OR1N1Q8NGS0 311 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 RPRMQ9NS64 109 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 CD207Q9UJ71 328 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 CSN3P07498 182 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 EMP1P54849 157 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 INSM1Q01101 510 aaPredicted RBP7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 SMAGPQ0VAQ4 97 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 CALHM1Q8IU99 346 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 TMEFF1Q8IYR6 380 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 WFDC5Q8TCV5 224 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 GPR146Q96CH1 333 aa7.21□□□□□ -1.25
SNCAIP-201ENST00000261367 LRRC30A6NM36 301 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 NGFP01138 241 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 HES3Q5TGS1 186 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 ACSM6Q6P461 480 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 C9orf40Q8IXQ3 194 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 OR2M3Q8NG83 312 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 OR52M1Q8NGK5 317 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 RTBDNQ9BSG5 229 aaPredicted RBP7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 PGPEP1LA6NFU8 196 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 TBX6O95947 436 aaPredicted RBP7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 DEFA4P12838 97 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 EIF4EBP2Q13542 120 aaPredicted RBP7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 RNFT1Q5M7Z0 435 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 ABHD17BQ5VST6 288 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 GFI1BQ5VTD9 330 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 WDR31Q8NA23 367 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 LOXL4Q96JB6 756 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 C18orf12Q96KH6 178 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 FAM234AQ9H0X4 552 aa7.21□□□□□ -1.26
SNCAIP-201ENST00000261367 CFAP54Q96N23 3096 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 REG1AP05451 166 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 CFPP27918 469 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 OR1D5P58170 312 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 ANKRD33Q7Z3H0 272 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 ZNF414Q96IQ9 312 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 MAP1LC3AQ9H492 121 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 GPR35Q9HC97 309 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 TMEM56-RWDD3S4R434 201 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 DXOO77932 396 aaKnown RBP7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 PSG2P11465 335 aa7.2□□□□□ -1.26
SNCAIP-201ENST00000261367 ELNP15502 786 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms