RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 IMMP2LQ96T52 175 aa13.45□□□□□ -0.26
LMNB1-201ENST00000261366 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
LMNB1-201ENST00000261366 SF3B5Q9BWJ5 86 aaKnown RBP13.45□□□□□ -0.26
LMNB1-201ENST00000261366 HIPK2Q9H2X6 1198 aa13.45□□□□□ -0.26
LMNB1-201ENST00000261366 TRAV38-1A0A0B4J264 116 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 P04436 131 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 GDF1P27539 372 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 ATP5G3P48201 142 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 B3GALT5-AS1P59052 145 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 TOMM20LQ6UXN7 152 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 TGIF2LYQ8IUE0 185 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 ZNF114Q8NC26 417 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 DSPP15924 2871 aaKnown RBP13.44□□□□□ -0.26
LMNB1-201ENST00000261366 NCKAP5O14513 1909 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 ZG16O60844 167 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 NDUFB4O95168 129 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 HOXA6P31267 233 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 TRIM61Q5EBN2 209 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 Q6ZS49 121 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 FAM58AQ8N1B3 248 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 OR1L1Q8NH94 360 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 PATZ1Q9HBE1 687 aaKnown RBP13.44□□□□□ -0.26
LMNB1-201ENST00000261366 NAGKQ9UJ70 344 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
LMNB1-201ENST00000261366 ASPMQ8IZT6 3477 aa13.44□□□□□ -0.26
LMNB1-201ENST00000261366 CEBPDP49716 269 aaPredicted RBP13.43□□□□□ -0.26
LMNB1-201ENST00000261366 THBS3P49746 956 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 ERVFC1-1P60608 527 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 PAM16Q9Y3D7 125 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 CTXND1A0A1B0GTU2 59 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 TGFBR3Q03167 851 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 ACOT6Q3I5F7 207 aaPredicted RBP13.43□□□□□ -0.26
LMNB1-201ENST00000261366 KRTAP27-1Q3LI81 207 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 COA6Q5JTJ3 125 aaKnown RBP13.43□□□□□ -0.26
LMNB1-201ENST00000261366 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 DRAM1Q8N682 238 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 NEIL1Q96FI4 390 aaPredicted RBP13.43□□□□□ -0.26
LMNB1-201ENST00000261366 PLPPR2Q96GM1 343 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 IMMP1LQ96LU5 166 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 CEP192Q8TEP8 1941 aa13.43□□□□□ -0.26
LMNB1-201ENST00000261366 TMEM265A0A087WTH1 108 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 TFF1P04155 84 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 OTX2P32243 289 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 RNPS1Q15287 305 aaKnown RBP13.42□□□□□ -0.26
LMNB1-201ENST00000261366 ZNF709Q8N972 641 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 SPSB4Q96A44 273 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 TECTBQ96PL2 329 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 MANBALQ9NQG1 85 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 NPSP0C0P6 89 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 TDGF1P3P51864 188 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 EDDM3BP56851 147 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 SGMS2Q8NHU3 365 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 AGMATQ9BSE5 352 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 PRDM14Q9GZV8 571 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A10PA6NDY2 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A18PA6NE21 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A16PA6NEW6 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A20PA6NIJ5 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A8PA6NJQ4 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A7PA6NKC0 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A22PA8MWA6 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A12PA8MX19 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A5PA8MXJ8 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A23PA8MXZ1 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 TMEM250H0YL14 139 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 MBP02144 154 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A15PP0C7V4 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A13PP0C7W8 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A14PP0C7W9 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 FAM90A24PP0C7X0 464 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 PPP1CBP62140 327 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 TUSC5Q8IXB3 177 aa13.42□□□□□ -0.26
LMNB1-201ENST00000261366 PINLYPA6NC86 204 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 BTF3P20290 206 aaKnown RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 EPHA8P29322 1005 aaPredicted RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 OR5A2Q8NGI9 324 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 LSM10Q969L4 123 aaKnown RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 DEPPQ9NTK1 212 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 LIN7CQ9NUP9 197 aaKnown RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 KIAA1549Q9HCM3 1950 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 GGCTO75223 188 aaKnown RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 KLF7O75840 302 aaPredicted RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 PDLIM4P50479 330 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 RAB4BP61018 213 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 CISD2Q8N5K1 135 aaKnown RBP13.41□□□□□ -0.26
LMNB1-201ENST00000261366 ANAPC16Q96DE5 110 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 PARD6AQ9NPB6 346 aa13.41□□□□□ -0.26
LMNB1-201ENST00000261366 HPRT1P00492 218 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 COX5AP20674 150 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 CCKARP32238 428 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 ADMP35318 185 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 GNB1P62873 340 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 LINC01551Q86U37 167 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 Q8NFD4 153 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 OR10P1Q8NGE3 313 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 PRR14LQ5THK1 2151 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 LY6G6EA0A0G2JKS1 128 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms