RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 GALNT14Q96FL9 552 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 PAXXQ9BUH6 204 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 SEBOXQ9HB31 216 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 RBM11P57052 281 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 GNB2P62879 340 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 TWIST1Q15672 202 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 TM4SF20Q53R12 229 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 KRTCAP3Q53RY4 240 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 SAMD13Q5VXD3 122 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 AUP1Q9Y679 476 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 ZNF716A6NP11 495 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 TNFSF15O95150 251 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 NUDT3O95989 172 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 IL2RAP01589 272 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 ACP1P24666 158 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 ARF6P62330 175 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 C3AR1Q16581 482 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 RHBDD2Q6NTF9 364 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 NR2C2APQ86WQ0 139 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 MRPL13Q9BYD1 178 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 NDUFB3O43676 98 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 HLA-DRB1P01911 266 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 RAC3P60763 192 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 DOLPP1Q86YN1 238 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 MMD2Q8IY49 270 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 YBX2Q9Y2T7 364 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 ANKRD36A6QL64 1941 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 C17orf51A8MQB3 221 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 GNG7O60262 68 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 DXOO77932 396 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 RPL30P62888 115 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 FAM222BQ8WU58 562 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 MIEN1Q9BRT3 115 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 ONECUT1Q9UBC0 465 aa8.43□□□□□ -1.06
CTDSPL2-201ENST00000260327 MAS1LP35410 378 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 ZNF83P51522 516 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 CALHM1Q8IU99 346 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 ASCL3Q9NQ33 180 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 PILRAQ9UKJ1 303 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 TRGV5A0A0B4J1U4 118 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 A0A0G2JK05 382 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 FAM157AC9JC47 383 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 CCL3P10147 92 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 SLC25A33Q9BSK2 321 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 PARP14Q460N5 1801 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 TP53BP1Q12888 1972 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 SLC17A3O00476 420 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 SRP19P09132 144 aaKnown RBP8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 COX7A1P24310 79 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 CRYBB3P26998 211 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 LRRC10Q5BKY1 277 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 ZNF766Q5HY98 468 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 SPEM1Q8N4L4 309 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 TPRX1Q8N7U7 411 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 LINC01590Q5TEZ4 76 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 PERPQ96FX8 193 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 RNF122Q9H9V4 155 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 TINAGQ9UJW2 476 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 NRXN2Q9P2S2 1712 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 H0Y980 276 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 TUSC5Q8IXB3 177 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 LSM10Q969L4 123 aaKnown RBP8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 TIMD4Q96H15 378 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 SOX21Q9Y651 276 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 CHD5Q8TDI0 1954 aa8.42□□□□□ -1.06
CTDSPL2-201ENST00000260327 C7orf71A4D174 169 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 SLC25A17O43808 307 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BKO60814 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BJP06899 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BOP23527 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 SRD5A2P31213 254 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BBP33778 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BDP58876 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BCP62807 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST2H2BEQ16778 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BHQ93079 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 C10orf35Q96D05 121 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BNQ99877 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 HIST1H2BMQ99879 126 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 A8MWL6 223 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 PGLYRP1O75594 196 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 RBPJQ06330 500 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 TMEM187Q14656 261 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 RPEQ96AT9 228 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 SARAFQ96BY9 339 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 SNRNP40Q96DI7 357 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 OR2H1Q9GZK4 316 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 SMOC1Q9H4F8 434 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 COA4Q9NYJ1 87 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 MPC1Q9Y5U8 109 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 IGLV1-36A0A0B4J1U3 117 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 LDLRAD2Q5SZI1 272 aa8.41□□□□□ -1.06
CTDSPL2-201ENST00000260327 MEGF9Q9H1U4 602 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms