RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SULT1A2P50226 295 aa16.28■□□□□ 0.2
PTPRE-201ENST00000254667 GFRA1P56159 465 aa16.28■□□□□ 0.2
PTPRE-201ENST00000254667 BCL2P10415 239 aa16.28■□□□□ 0.2
PTPRE-201ENST00000254667 P2RY4P51582 365 aa16.28■□□□□ 0.2
PTPRE-201ENST00000254667 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
PTPRE-201ENST00000254667 C1orf162Q8NEQ5 155 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-201ENST00000254667 PPIAL4CA0A0B4J2A2 164 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 A0A1W2PS18 150 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 ATXN7O15265 892 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-201ENST00000254667 PPIAL4GP0DN37 164 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 OR10J1P30954 320 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 UCP3P55916 312 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 FGFRL1Q8N441 504 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 OR5P3Q8WZ94 311 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 TMEM186Q96B77 213 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 MRPS18CQ9Y3D5 142 aaKnown RBP16.27■□□□□ 0.2
PTPRE-201ENST00000254667 CYB5R3P00387 301 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-201ENST00000254667 NAT2P11245 290 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 NUBP1P53384 320 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 TMEM191AQ9H0A3 160 aa16.27■□□□□ 0.2
PTPRE-201ENST00000254667 M0R2Z0 102 aa16.27■□□□□ 0.19
PTPRE-201ENST00000254667 ADAM11O75078 769 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 GLRXP35754 106 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 WNT5AP41221 380 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 IZUMO4Q1ZYL8 232 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 DCAF12L2Q5VW00 463 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 RBKSQ9H477 322 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 PCSK4Q6UW60 755 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 GBGT1Q8N5D6 347 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 STPG3Q8N7X2 389 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 ZNF735P0CB33 412 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 IGHV1-69-2A0A0G2JMI3 117 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 HSPE1P61604 102 aaKnown RBP16.26■□□□□ 0.19
PTPRE-201ENST00000254667 HOXA4Q00056 320 aaPredicted RBP16.26■□□□□ 0.19
PTPRE-201ENST00000254667 ELOBQ15370 118 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 MRPL14Q6P1L8 145 aaKnown RBP16.26■□□□□ 0.19
PTPRE-201ENST00000254667 SIGLEC12Q96PQ1 595 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 GSX1Q9H4S2 264 aaPredicted RBP16.26■□□□□ 0.19
PTPRE-201ENST00000254667 OR5AC2Q9NZP5 309 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 ELF5Q9UKW6 265 aaPredicted RBP16.26■□□□□ 0.19
PTPRE-201ENST00000254667 PRSS1P07477 247 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 IMMP1LQ96LU5 166 aa16.26■□□□□ 0.19
PTPRE-201ENST00000254667 IGLV3-12A0A075B6K2 115 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 RFPL3SP0C7P2 107 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 LDLRAD3Q86YD5 345 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 SELENOHQ8IZQ5 122 aaKnown RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 LSM10Q969L4 123 aaKnown RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 CFDP00746 253 aaPredicted RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 HIST1H1BP16401 226 aaKnown RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 CEBPDP49716 269 aaPredicted RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 LRP11Q86VZ4 500 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 IGKV3-7A0A075B6H7 116 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 TRAV30A0A087WSZ9 112 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 MUC1P15941 1255 aaPredicted RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 HIST3H3Q16695 136 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 FADS6Q8N9I5 356 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 ZNF430Q9H8G1 570 aaPredicted RBP16.25■□□□□ 0.19
PTPRE-201ENST00000254667 TMEM140Q9NV12 185 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 IGHV3-21A0A0B4J1V1 117 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 CD74P04233 296 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 PDLIM4P50479 330 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 SLC35E4Q6ICL7 350 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 GPR146Q96CH1 333 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 RSRP1Q9BUV0 290 aa16.25■□□□□ 0.19
PTPRE-201ENST00000254667 RCC1P18754 421 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-201ENST00000254667 LIPFP07098 398 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 LINC00869P0C866 280 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 METTL26Q96S19 204 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 ARID1AO14497 2285 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 IGHV3-72A0A0B4J1Y9 119 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 OR2A4O95047 310 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 THY1P04216 161 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 ZNF708P17019 499 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 ATP5IP56385 69 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-201ENST00000254667 HERVK_113P61574 105 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 SLC25A53Q5H9E4 307 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 ABHD12Q8N2K0 398 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 MUC15Q8N387 334 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 OR2A7Q96R45 310 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 LOC105371242A0A075B767 164 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 MRPL54Q6P161 138 aaKnown RBP16.24■□□□□ 0.19
PTPRE-201ENST00000254667 PQLC2Q6ZP29 291 aa16.24■□□□□ 0.19
PTPRE-201ENST00000254667 ZCCHC14Q8WYQ9 949 aaKnown RBP16.24■□□□□ 0.19
PTPRE-201ENST00000254667 CSN3P07498 182 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 RD3LP0DJH9 198 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 SCGB1C2P0DMR2 95 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 APOBEC3AP31941 199 aaPredicted RBP16.23■□□□□ 0.19
PTPRE-201ENST00000254667 CLEC7AQ9BXN2 247 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 CXCL2P19875 107 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 G0S2P27469 103 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 SUCLG1P53597 346 aaKnown RBP16.23■□□□□ 0.19
PTPRE-201ENST00000254667 OVCH2Q7RTZ1 564 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 OR4C13Q8NGP0 309 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 RALYQ9UKM9 306 aaKnown RBP16.23■□□□□ 0.19
PTPRE-201ENST00000254667 BMPR1BO00238 502 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 ZNHIT1O43257 154 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 DNM1P46Q6ZS02 220 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 UNQ5815/PRO19632Q6UWF5 114 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 AQP10Q96PS8 301 aa16.23■□□□□ 0.19
PTPRE-201ENST00000254667 TGFBR3LH3BV60 316 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms