RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 KITLGP21583 273 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 Q6ZPA2 131 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 RPS10P46783 165 aaKnown RBP13.21□□□□□ -0.29
RFX1-201ENST00000254325 ABHD17AQ96GS6 310 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 MEGF10Q96KG7 1140 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 RBKSQ9H477 322 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 URGCP-MRPS24S4R325 110 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 C7orf77A4D0Y5 90 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 OR2C1O95371 312 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 MST1LQ2TV78 715 aa13.21□□□□□ -0.29
RFX1-201ENST00000254325 CLDN14O95500 239 aa13.21□□□□□ -0.3
RFX1-201ENST00000254325 S100A2P29034 98 aa13.21□□□□□ -0.3
RFX1-201ENST00000254325 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.3
RFX1-201ENST00000254325 RFNGQ9Y644 331 aa13.21□□□□□ -0.3
RFX1-201ENST00000254325 NBASA2RRP1 2371 aa13.21□□□□□ -0.3
RFX1-201ENST00000254325 A0A0G2JRQ6 117 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 ISOC2Q96AB3 205 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 ABHD14AQ9BUJ0 271 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 LOC105371267A0A1B0GV96 52 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 MBD3L4A6NDZ8 208 aaPredicted RBP13.2□□□□□ -0.3
RFX1-201ENST00000254325 MBD3L3A6NE82 208 aaPredicted RBP13.2□□□□□ -0.3
RFX1-201ENST00000254325 MBD3L5A6NJ08 208 aaPredicted RBP13.2□□□□□ -0.3
RFX1-201ENST00000254325 TMPRSS2O15393 492 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 ERVK11-1P61568 191 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 TNFRSF9Q07011 255 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 RAB31Q13636 194 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 C1orf87Q8N0U7 546 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 RPRMLQ8N4K4 120 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 MBD3L2Q8NHZ7 208 aaPredicted RBP13.2□□□□□ -0.3
RFX1-201ENST00000254325 LURAP1Q96LR2 239 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 CCL13Q99616 98 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 IFT22Q9H7X7 185 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 PKDREJQ9NTG1 2253 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 C17orf98A8MV24 154 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 CCL17Q92583 94 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 RARRES2Q99969 163 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 TNFSF13O75888 250 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 ZNF66Q6ZN08 573 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 ZNF429Q86V71 674 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
RFX1-201ENST00000254325 CYB5R3P00387 301 aaPredicted RBP13.19□□□□□ -0.3
RFX1-201ENST00000254325 RAB7AP51149 207 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 TLE1Q04724 770 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 IGFL2Q6UWQ7 119 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 Q6ZS92 163 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 LEAP2Q969E1 77 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 OR4C12Q96R67 309 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 TMEM147Q9BVK8 224 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 RAMP3O60896 148 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 PSMB3P49720 205 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 KIAA1456Q9P272 454 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 ZDHHC8Q9ULC8 765 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 ARG1P05089 322 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 SLC25A6P12236 298 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
RFX1-201ENST00000254325 CYB5BO43169 146 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 GYPAP02724 150 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 MRPS11P82912 194 aaKnown RBP13.18□□□□□ -0.3
RFX1-201ENST00000254325 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 MBNL2Q5VZF2 373 aaKnown RBP13.18□□□□□ -0.3
RFX1-201ENST00000254325 CST9LP1Q5W188 147 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 ZNF474Q6S9Z5 364 aaPredicted RBP13.18□□□□□ -0.3
RFX1-201ENST00000254325 Q6ZR03 302 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 RAB39BQ96DA2 213 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 ACTR3CQ9C0K3 210 aaPredicted RBP13.18□□□□□ -0.3
RFX1-201ENST00000254325 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 CALYQ9NYX4 217 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 IGKV1-5P01602 117 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 ADCYAP1P18509 176 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 FAM24BQ8N5W8 94 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 COQ2Q96H96 371 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 VPS13AQ96RL7 3174 aa13.18□□□□□ -0.3
RFX1-201ENST00000254325 FAM90A26D6RGX4 464 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 ZG16O60844 167 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 EIF3GO75821 320 aaKnown RBP eCLIP13.17□□□□□ -0.3
RFX1-201ENST00000254325 ZNF880Q6PDB4 577 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 Q6ZRM9 215 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 MBNL3Q9NUK0 354 aaKnown RBP13.17□□□□□ -0.3
RFX1-201ENST00000254325 PRRC2CQ9Y520 2896 aaKnown RBP13.17□□□□□ -0.3
RFX1-201ENST00000254325 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 MBP02144 154 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 ATP6V1FQ16864 119 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 POLEQ07864 2286 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 NPIPB11E5RHQ5 1161 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 CD40P25942 277 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 OR4S2Q8NH73 311 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 hADV38S2A0JD32 116 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 ADIRFQ15847 76 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 ETV3LQ6ZN32 361 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 TCTEX1D1Q8N7M0 179 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 SAP30LQ9HAJ7 183 aa13.17□□□□□ -0.3
RFX1-201ENST00000254325 EGR1P18146 543 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 RTL8BQ17RB0 113 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms