RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 RPL39P5Q59GN2 51 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 ZNF429Q86V71 674 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 TCTEX1D1Q8N7M0 179 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 RAB2BQ8WUD1 216 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 EDARADDQ8WWZ3 215 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 RNF5Q99942 180 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 FBXL15Q9H469 300 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 LSM2Q9Y333 95 aaKnown RBP16.35■□□□□ 0.21
NEDD8-201ENST00000250495 NBEAL2Q6ZNJ1 2754 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 A0A1W2PN81 502 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 H7C2Y5 167 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 ARSBP15848 533 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 ZBTB25P24278 435 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 CHRNA7P36544 502 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 CEACAM6P40199 344 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 CRIP2P52943 208 aaPredicted RBP16.34■□□□□ 0.21
NEDD8-201ENST00000250495 CX3CL1P78423 397 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 TBCEQ15813 527 aaPredicted RBP16.34■□□□□ 0.21
NEDD8-201ENST00000250495 ECSCRQ19T08 205 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 ASPHD1Q5U4P2 390 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 UFD1Q92890 307 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 ABHD14BQ96IU4 210 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 AGMATQ9BSE5 352 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 CCDC90BQ9GZT6 254 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 LPAR5Q9H1C0 372 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 KCNK15Q9H427 330 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 RNF150Q9ULK6 438 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 FOXA2Q9Y261 457 aaPredicted RBP16.34■□□□□ 0.21
NEDD8-201ENST00000250495 WASHC3Q9Y3C0 194 aa16.34■□□□□ 0.21
NEDD8-201ENST00000250495 H0YJW9 148 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 OVOL1O14753 267 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 SOCS1O15524 211 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 HSPA12AO43301 675 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 LY86O95711 162 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 LIPKQ5VXJ0 399 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 GLDNQ6ZMI3 551 aaPredicted RBP16.33■□□□□ 0.2
NEDD8-201ENST00000250495 FAM89BQ8N5H3 189 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 OR5AN1Q8NGI8 311 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 DCUN1D4Q92564 292 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 C11orf54Q9H0W9 315 aaPredicted RBP16.33■□□□□ 0.2
NEDD8-201ENST00000250495 PLGRKTQ9HBL7 147 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 AK3Q9UIJ7 227 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 HSF4Q9ULV5 492 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 NUBP2Q9Y5Y2 271 aa16.33■□□□□ 0.2
NEDD8-201ENST00000250495 A0A0A6YYD4 124 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 H3BMQ9 156 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 RANBP1P43487 201 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 NDPQ00604 133 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 TRAM1Q15629 374 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 C19orf54Q5BKX5 351 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 UBE2UQ5VVX9 321 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 GPR107Q5VW38 600 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 PYHIN1Q6K0P9 492 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 CD200R1LQ6Q8B3 271 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 ABHD5Q8WTS1 349 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 TMEM203Q969S6 136 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 ACOT13Q9NPJ3 140 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 FBXO7Q9Y3I1 522 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 SMAD5-AS1Q9Y6J3 95 aa16.32■□□□□ 0.2
NEDD8-201ENST00000250495 LINC01619G3V211 115 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 FCN1O00602 326 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 SLC17A2O00624 439 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 SOX15O60248 233 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 CD40LGP29965 261 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 HLA-DRB3P79483 266 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 IRF3Q14653 427 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 P2RY14Q15391 338 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 AKIRIN2Q53H80 203 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 PTX4Q96A99 478 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 ASCL2Q99929 193 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 TOLLIPQ9H0E2 274 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 PARP12Q9H0J9 701 aaKnown RBP16.31■□□□□ 0.2
NEDD8-201ENST00000250495 A3GALT2U3KPV4 340 aa16.31■□□□□ 0.2
NEDD8-201ENST00000250495 KMT2CQ8NEZ4 4911 aaKnown RBP16.31■□□□□ 0.2
NEDD8-201ENST00000250495 ARL6IP5O75915 188 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 TPBGQ13641 420 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 ZNF562Q6V9R5 426 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 TMEM91Q6ZNR0 172 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 PPP1R27Q86WC6 154 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 ANKRD13BQ86YJ7 626 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 DLX4Q92988 240 aaPredicted RBP16.3■□□□□ 0.2
NEDD8-201ENST00000250495 HDHD3Q9BSH5 251 aaPredicted RBP16.3■□□□□ 0.2
NEDD8-201ENST00000250495 ALX4Q9H161 411 aaPredicted RBP16.3■□□□□ 0.2
NEDD8-201ENST00000250495 Q9N2K0 584 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 ISYNA1Q9NPH2 558 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 OR1A1Q9P1Q5 309 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 ZNF221Q9UK13 617 aa16.3■□□□□ 0.2
NEDD8-201ENST00000250495 AK6Q9Y3D8 172 aaKnown RBP16.3■□□□□ 0.2
NEDD8-201ENST00000250495 SAP30O75446 220 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 LGALS1P09382 135 aaKnown RBP16.29■□□□□ 0.2
NEDD8-201ENST00000250495 SCTP09683 121 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 HSMCR30P0CW71 290 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 EGR2P11161 476 aaPredicted RBP16.29■□□□□ 0.2
NEDD8-201ENST00000250495 CPEP16870 476 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 PSMA1P25786 263 aaKnown RBP16.29■□□□□ 0.2
NEDD8-201ENST00000250495 VEGFCP49767 419 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 TMEM50BP56557 158 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 RAB11BQ15907 218 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 ACTBL2Q562R1 376 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 UNQ5815/PRO19632Q6UWF5 114 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms