RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 FAM24AA6NFZ4 105 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 RNF212BA8MTL3 300 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 LINC00205P59089 165 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 ODF3L1Q8IXM7 274 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 OR2C3Q8N628 320 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 CALYQ9NYX4 217 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 OR6C3Q9NZP0 311 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 DOPEY1Q5JWR5 2465 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 PROP1O75360 226 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 MARVELD3Q96A59 401 aa19.31■□□□□ 0.68
SYNGR3-201ENST00000248121 PIGBOS1A0A0B4J2F0 54 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 IGSF23A1L1A6 192 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 SIGLEC5O15389 551 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 SOD3P08294 240 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 LPAR6P43657 344 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 OR2B11Q5JQS5 317 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 ZNF295-AS1Q8N0V1 137 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 CCL17Q92583 94 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 PLA2G2EQ9NZK7 142 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 GNG12Q9UBI6 72 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 CACNG5Q9UF02 275 aa19.3■□□□□ 0.68
SYNGR3-201ENST00000248121 LINC00473A8K010 186 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 YPEL1O60688 119 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 JTBO76095 146 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 ZNF134P52741 427 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 EWSR1Q01844 656 aaKnown RBP eCLIP19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 YPEL2Q96QA6 119 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 FAM234AQ9H0X4 552 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 MS4A5Q9H3V2 200 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 LYRM2Q9NU23 88 aaPredicted RBP19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 SPTAN1Q13813 2472 aaKnown RBP19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 C17orf98A8MV24 154 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 LYNX1G3V0Z9 82 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 CHST1O43916 411 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 FGF2P09038 288 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 LYNX1P0DP58 116 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 AKR1C2P52895 323 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 PAX9P55771 341 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 SRSF1Q07955 248 aaKnown RBP eCLIP19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 Q3ZCU0 254 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 UBAC2Q8NBM4 344 aa19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 RNASE11Q8TAA1 199 aaKnown RBP19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 UTP20O75691 2785 aaKnown RBP19.29■□□□□ 0.68
SYNGR3-201ENST00000248121 LRRC30A6NM36 301 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 TMEM178BH3BS89 294 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 IGHV3-7P01780 117 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 EGLN1Q9GZT9 426 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 ARV1Q9H2C2 271 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 UBR5O95071 2799 aaPredicted RBP19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 LGALS8O00214 317 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 FCN3O75636 299 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 PVALBP20472 110 aaPredicted RBP19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 CAV2P51636 162 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 EIF5AP63241 154 aaKnown RBP19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 HSD17B13Q7Z5P4 300 aaPredicted RBP19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 TMEM252Q8N6L7 170 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 RNF141Q8WVD5 230 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 EDARADDQ8WWZ3 215 aa19.28■□□□□ 0.68
SYNGR3-201ENST00000248121 KBTBD11-OT1A0A1B0GTJ5 212 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 A8MXK9 166 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 LY6HO94772 140 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 CLDN1O95832 211 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 CATR1Q13166 79 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 C11orf71Q6IPW1 123 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 OR1S2Q8NGQ3 325 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 TCTEX1D2Q8WW35 142 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 TMEM106BQ9NUM4 274 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 CLN8Q9UBY8 286 aa19.27■□□□□ 0.68
SYNGR3-201ENST00000248121 P0C879 139 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 MMP9P14780 707 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 ZNF816Q0VGE8 651 aaPredicted RBP19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 SPAG16Q8N0X2 631 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 EIF4E3Q8N5X7 224 aaKnown RBP19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 IFI27L2Q9H2X8 130 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 TMPRSS2O15393 492 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 SLC31A2O15432 143 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 FBXO24O75426 580 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 S1PR2O95136 353 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 ZNF66Q6ZN08 573 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 LEAP2Q969E1 77 aa19.26■□□□□ 0.67
SYNGR3-201ENST00000248121 DANCRP0C864 163 aa19.25■□□□□ 0.67
SYNGR3-201ENST00000248121 VAMP2P63027 116 aa19.25■□□□□ 0.67
SYNGR3-201ENST00000248121 LRRC20Q8TCA0 184 aa19.25■□□□□ 0.67
SYNGR3-201ENST00000248121 HSD17B10Q99714 261 aaKnown RBP19.25■□□□□ 0.67
SYNGR3-201ENST00000248121 MMP24Q9Y5R2 645 aa19.25■□□□□ 0.67
SYNGR3-201ENST00000248121 TRGV10A0A0A0MS01 117 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 TRAV38-1A0A0B4J264 116 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 G6PCP35575 357 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 GPR12P47775 334 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 C1orf229Q6ZS94 237 aaPredicted RBP19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 GFOD1Q9NXC2 390 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 CHD6Q8TD26 2715 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 YLPM1P49750 1951 aaKnown RBP19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 PPIAL4EA0A075B759 164 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 IGHV1-69-2A0A0G2JMI3 117 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 PPIAL4DF5H284 164 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 WRBO00258 174 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 TNFRSF13BO14836 293 aaPredicted RBP19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 PPIAL4FP0DN26 164 aa19.24■□□□□ 0.67
SYNGR3-201ENST00000248121 DUTP33316 252 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms