RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ETV3LQ6ZN32 361 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 RPRMLQ8N4K4 120 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 ZNF808Q8N4W9 903 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-201ENST00000237186 TPRX1Q8N7U7 411 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 MBD3L1Q8WWY6 194 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 EDARADDQ8WWZ3 215 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 MEGF10Q96KG7 1140 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 RBKSQ9H477 322 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 A0A1B0GV50 99 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 ODAMA1E959 279 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 M0R1B8 84 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
UBE3D-201ENST00000237186 GATA4P43694 442 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 KLF3P57682 345 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-201ENST00000237186 CLDND2Q8NHS1 167 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 CD300LFQ8TDQ1 290 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 TCTEX1D2Q8WW35 142 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 MRPL37Q9BZE1 423 aaKnown RBP13.48□□□□□ -0.25
UBE3D-201ENST00000237186 WDR61Q9GZS3 305 aaKnown RBP13.48□□□□□ -0.25
UBE3D-201ENST00000237186 JPT1Q9UK76 154 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 YPEL1O60688 119 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 S1PR2O95136 353 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 SNRNP70P08621 437 aaKnown RBP13.47□□□□□ -0.25
UBE3D-201ENST00000237186 G6PCP35575 357 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 ZNF816Q0VGE8 651 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-201ENST00000237186 ATP6V1FQ16864 119 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 RNF212Q495C1 297 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 SPANXN5Q5MJ07 72 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 CENPVQ7Z7K6 275 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-201ENST00000237186 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 RFESDQ8TAC1 157 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 FAM57AQ8TBR7 257 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 YPEL2Q96QA6 119 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 OR2V2Q96R30 315 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 OR4C12Q96R67 309 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 CLCC1Q96S66 551 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 RPRMQ9NS64 109 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 KLF2Q9Y5W3 355 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-201ENST00000237186 INTS1Q8N201 2190 aaKnown RBP13.47□□□□□ -0.25
UBE3D-201ENST00000237186 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
UBE3D-201ENST00000237186 LINC00473A8K010 186 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 A8MXE2 369 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 F2RL2O00254 374 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.25
UBE3D-201ENST00000237186 OR13C7P0DN81 318 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 NHLH1Q02575 133 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 FOXC1Q12948 553 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 ICAM4Q14773 271 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 PINX1Q96BK5 328 aaKnown RBP13.46□□□□□ -0.25
UBE3D-201ENST00000237186 DCTN5Q9BTE1 182 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 RSG1Q9BU20 258 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 TIMM9Q9Y5J7 89 aa13.46□□□□□ -0.25
UBE3D-201ENST00000237186 K7EM74 188 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 M0R036 132 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 MT-ND4LP03901 98 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 RAB13P51153 203 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 RPS23P62266 143 aaKnown RBP13.46□□□□□ -0.26
UBE3D-201ENST00000237186 SLC38A11Q08AI6 406 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 AARDQ4LEZ3 155 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 MORN2Q502X0 79 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 LILRB2Q8N423 598 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 FAM222BQ8WU58 562 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 C14orf79Q96F83 325 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 ESRP2Q9H6T0 727 aaKnown RBP13.46□□□□□ -0.26
UBE3D-201ENST00000237186 PSG11Q9UQ72 335 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 GTF3C1Q12789 2109 aa13.46□□□□□ -0.26
UBE3D-201ENST00000237186 AKAP13Q12802 2813 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 PROP1O75360 226 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 DUTP33316 252 aaKnown RBP13.45□□□□□ -0.26
UBE3D-201ENST00000237186 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 BTNL3Q6UXE8 466 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 TAF15Q92804 592 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBE3D-201ENST00000237186 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 CIB3Q96Q77 187 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-201ENST00000237186 GAB2Q9UQC2 676 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 PRELID1Q9Y255 219 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 CFAP47Q6ZTR5 3102 aa13.45□□□□□ -0.26
UBE3D-201ENST00000237186 ITGB1BP1O14713 200 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 CGB3P0DN86 165 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 CGB7P0DN87 165 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 EDDM3AQ14507 147 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 HAGHQ16775 308 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 OR2B11Q5JQS5 317 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 H2BFWTQ7Z2G1 175 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 DEFB108AA8MXU0 73 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 RBFOX2O43251 390 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBE3D-201ENST00000237186 LY86O95711 162 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 AKR1C3P42330 323 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 LOXL3P58215 753 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 Q3ZCU0 254 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 MOGAT3Q86VF5 341 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 OR6C3Q9NZP0 311 aa13.44□□□□□ -0.26
UBE3D-201ENST00000237186 KIAA2026Q5HYC2 2103 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms