RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 B4E171 279 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 H0Y980 276 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 UCP1P25874 307 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 TSPAN7P41732 249 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 RNASEKQ6P5S7 137 aaKnown RBP12.42□□□□□ -0.42
PRDM4-201ENST00000228437 DTX1Q86Y01 620 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 CA11O75493 328 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 TIAF1O95411 115 aa12.42□□□□□ -0.42
PRDM4-201ENST00000228437 GBGT1Q8N5D6 347 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 FAM166BA8MTA8 275 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 ERVK-16P61578 105 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 OR8G5Q8NG78 346 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 TTC28Q96AY4 2481 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 RNF212BA8MTL3 300 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 CD27P26842 260 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 ZNF726P1Q15940 193 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 LPAR2Q9HBW0 351 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 TMEM106BQ9NUM4 274 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 TAAR3PQ9P1P4 343 aa12.41□□□□□ -0.42
PRDM4-201ENST00000228437 NUP210Q8TEM1 1887 aaPredicted RBP12.4□□□□□ -0.42
PRDM4-201ENST00000228437 A0A1B0GW64 132 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 LRP5LA4QPB2 252 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 GDF9O60383 454 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
PRDM4-201ENST00000228437 CEBPDP49716 269 aaPredicted RBP12.4□□□□□ -0.42
PRDM4-201ENST00000228437 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 OR2H1Q9GZK4 316 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
PRDM4-201ENST00000228437 FAM27BQ5VT28 67 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 LRTM2Q8N967 370 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 RIMS4Q9H426 269 aaPredicted RBP12.4□□□□□ -0.42
PRDM4-201ENST00000228437 BET1LQ9NYM9 111 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 CDKN1AP38936 164 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 RAB31Q13636 194 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 LRRC75BQ2VPJ9 315 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 TIGITQ495A1 244 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 CARFQ8N187 725 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 NHLRC2Q8NBF2 726 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
PRDM4-201ENST00000228437 MT-CO2P00403 227 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 NGFP01138 241 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 LINC00271P0C7V0 271 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 RND2P52198 227 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 MRGPRDQ8TDS7 321 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 OIT3Q8WWZ8 545 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 MIEN1Q9BRT3 115 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 TMEM38BQ9NVV0 291 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 ATP23Q9Y6H3 246 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
PRDM4-201ENST00000228437 HSBP1L1C9JCN9 74 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 NUPR1O60356 82 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.39□□□□□ -0.43
PRDM4-201ENST00000228437 OR10D3Q8NH80 312 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 FGFBP3Q8TAT2 258 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 WDYHV1Q96HA8 205 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 TECRQ9NZ01 308 aaKnown RBP12.39□□□□□ -0.43
PRDM4-201ENST00000228437 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 WIPI2Q9Y4P8 454 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 FCGR3BO75015 233 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 SRP14P37108 136 aaKnown RBP12.39□□□□□ -0.43
PRDM4-201ENST00000228437 MIC13Q5XKP0 118 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 UNQ5815/PRO19632Q6UWF5 114 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 KLHDC1Q8N7A1 406 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
PRDM4-201ENST00000228437 A0A1B0GWJ7 208 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 IGHEP01854 428 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 CCL1P22362 96 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 OR4P4Q8NGL7 312 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 ABHD14BQ96IU4 210 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 OR8B8Q15620 311 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 SIGLEC12Q96PQ1 595 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 CCR5P51681 352 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 UCP2P55851 309 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 SLC23A3Q6PIS1 610 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 GCNT2Q8N0V5 402 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 APOBEC3DQ96AK3 386 aaPredicted RBP12.38□□□□□ -0.43
PRDM4-201ENST00000228437 SFRP2Q96HF1 295 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 CDIPTO14735 213 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 TGIF2LYQ8IUE0 185 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 PARD6GQ9BYG4 376 aaPredicted RBP12.38□□□□□ -0.43
PRDM4-201ENST00000228437 SRXN1Q9BYN0 137 aa12.38□□□□□ -0.43
PRDM4-201ENST00000228437 TBL2Q9Y4P3 447 aaKnown RBP12.38□□□□□ -0.43
PRDM4-201ENST00000228437 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 CHD7Q9P2D1 2997 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 TMEM250H0YL14 139 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 RAB29O14966 203 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 PIAS2O75928 621 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 PAX9P55771 341 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 RPEL1Q2QD12 228 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 ARL14EPLP0DKL9 152 aa12.37□□□□□ -0.43
PRDM4-201ENST00000228437 SRIP30626 198 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms